Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC027216.1-201ENST00000577726 685 ntBASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 AL137000.1-201ENST00000610528 1244 ntBASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 AC138965.3-201ENST00000623875 498 ntBASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 AC027559.1-201ENST00000636288 271 ntBASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 MAPK10-350ENST00000641777 965 ntBASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 SMG1P5-202ENST00000529428 4219 ntBASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 SMG1P2-201ENST00000566127 4221 ntBASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 AC010132.4-201ENST00000569883 1368 ntBASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC28BQ9BUN5 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 LINC01808-203ENST00000641932 1643 ntBASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 AC009962.1-201ENST00000567327 3813 ntBASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 AC005702.3-201ENST00000585345 1447 ntBASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 RN7SKP191-201ENST00000364713 306 ntBASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 AC083862.1-201ENST00000427378 1242 ntBASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 AF305872.1-201ENST00000485217 471 ntBASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 RN7SL714P-201ENST00000487050 298 ntBASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 AC105420.1-201ENST00000504389 582 ntBASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 ENPP7P3-201ENST00000509123 241 ntBASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 AC023968.1-201ENST00000560719 475 ntBASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 AC009852.2-201ENST00000567898 485 ntBASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 MIR4312-201ENST00000579909 76 ntBASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 AC023389.2-201ENST00000580031 955 ntBASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC28BQ9BUN5 AC138907.8-201ENST00000623981 2256 ntBASIC6.02□□□□□ -1.44
CCDC28BQ9BUN5 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 FDPSP5-201ENST00000399474 1057 ntBASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AC024937.2-201ENST00000411669 1242 ntBASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 MICG-208ENST00000416822 132 ntBASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 YWHAZP5-201ENST00000419975 730 ntBASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 RPS3AP38-201ENST00000435889 763 ntBASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 CYCSP51-201ENST00000443545 318 ntBASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 IGHV4-55-201ENST00000520889 368 ntBASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AC244502.2-201ENST00000543361 851 ntBASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AC005519.1-201ENST00000554490 601 ntBASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AC126323.4-201ENST00000566935 234 ntBASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 MIR4433B-201ENST00000581329 102 ntBASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AC005332.4-201ENST00000592752 579 ntBASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 DYNLL1P1-201ENST00000595442 269 ntBASIC6.02□□□□□ -1.45
CCDC28BQ9BUN5 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 213.1 ms