Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 ACSL1-211ENST00000515030 3948 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC044810.2-202ENST00000527847 2503 ntTSL 2 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 NNT-208ENST00000512996 4288 ntTSL 5 BASIC7.88□□□□□ -1.15
USB1Q9BQ65 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AC087501.5-201ENST00000607496 2374 ntBASIC7.88□□□□□ -1.15
USB1Q9BQ65 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
USB1Q9BQ65 AL390728.4-201ENST00000421406 1465 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 OSBPL3-203ENST00000396431 2969 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 CHRM2-202ENST00000401861 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 C17orf80-205ENST00000535032 2129 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 HSPD1P5-201ENST00000511127 1720 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 DLG2-218ENST00000524982 2872 ntTSL 2 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AF131215.2-201ENST00000531549 1710 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 SBNO1-203ENST00000602398 4313 ntAPPRIS ALT1 TSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC023790.2-201ENST00000543321 2403 ntTSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 DIS3L2-202ENST00000325385 3501 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 OR52K1-201ENST00000307632 1030 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 RNU6-1318P-201ENST00000365389 103 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 SNORA33.2-201ENST00000365413 134 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 GSTA5-202ENST00000370989 892 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 FAM209B-201ENST00000371325 694 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 Y_RNA.384-201ENST00000383909 102 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 RNU6-244P-201ENST00000391028 104 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 RPL5P35-201ENST00000398869 816 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AL139128.1-201ENST00000413921 941 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 OR1AA1P-201ENST00000419597 916 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 RAD23BP1-201ENST00000421404 1227 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 AL353193.1-201ENST00000421444 268 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 AL445669.1-201ENST00000426743 755 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 DYNLL1P7-201ENST00000429273 258 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 HMGN1P36-201ENST00000446623 298 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC132479.1-201ENST00000449160 144 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 AL591438.2-201ENST00000452635 691 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AL357874.2-201ENST00000457044 679 ntTSL 3 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AP001318.1-201ENST00000476981 321 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AL096701.3-202ENST00000483736 615 ntTSL 2 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 RPL17P37-201ENST00000490729 548 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC093809.1-201ENST00000509155 340 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 AF186996.3-201ENST00000509527 964 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC103409.1-202ENST00000518416 577 ntTSL 4 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 CASP1-204ENST00000525825 1237 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 LINC00929-205ENST00000557672 514 ntTSL 3 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AP001178.2-201ENST00000580007 326 ntTSL 3 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 RN7SL237P-201ENST00000580912 287 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 RN7SL804P-201ENST00000582466 298 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AL591926.6-201ENST00000617375 415 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 ABBA01040607.1-201ENST00000640749 321 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
USB1Q9BQ65 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 PHF2P2-202ENST00000444553 2865 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
USB1Q9BQ65 AL356361.1-201ENST00000400943 1459 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 MAPK10-281ENST00000641170 3070 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 CUBNP1-201ENST00000412710 1790 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 MAPK6PS2-201ENST00000379571 2060 ntBASIC7.87□□□□□ -1.15
USB1Q9BQ65 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
USB1Q9BQ65 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC018647.1-202ENST00000449644 1651 ntTSL 5 BASIC7.86□□□□□ -1.15
USB1Q9BQ65 AC009021.2-201ENST00000567401 1666 ntBASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms