Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AL162233.1-201ENST00000620014 944 ntBASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
CDK5RAP3Q96JB5 AL513548.1-201ENST00000562904 1724 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC105749.1-201ENST00000631338 2008 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 RNU1-84P-201ENST00000365447 164 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 MIR7-1-201ENST00000384871 110 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AL139039.2-201ENST00000407436 479 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AL445991.1-201ENST00000450381 475 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC114324.2-202ENST00000503812 134 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC106800.3-201ENST00000511389 308 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 SNORA26.10-201ENST00000516427 141 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 IGKV1D-22-201ENST00000518953 324 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 MTND2P17-201ENST00000550281 688 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC011497.2-201ENST00000600255 639 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AL589743.6-201ENST00000611025 117 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC011455.2-201ENST00000599320 3336 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC079753.1-201ENST00000623243 3868 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC007406.5-201ENST00000570140 3170 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AL929601.4-201ENST00000613011 1341 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC005034.3-201ENST00000604845 1747 ntBASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
CDK5RAP3Q96JB5 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 STAG3L4-201ENST00000352103 530 ntBASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 GPN3P1-201ENST00000423883 535 ntBASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 AC093664.1-201ENST00000511779 289 ntBASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 AC112206.4-201ENST00000515142 405 ntBASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 KCTD9P4-201ENST00000526766 1166 ntBASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 BMPR1APS2-201ENST00000527904 1012 ntBASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 AC092451.2-201ENST00000538746 658 ntBASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 AC244034.2-201ENST00000562504 509 ntBASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC7.23□□□□□ -1.25
CDK5RAP3Q96JB5 AC016542.1-201ENST00000608259 493 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms