Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LMO3Q8TAP4 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
LMO3Q8TAP4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LMO3Q8TAP4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
LMO3Q8TAP4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
LMO3Q8TAP4 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
LMO3Q8TAP4 AC022164.1-201ENST00000568767 2673 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 RNA5SP279-201ENST00000365513 117 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 RNA5SP156-201ENST00000410250 110 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 RN7SKP166-201ENST00000410812 305 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 PPIAP7-201ENST00000454070 489 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 RN7SL352P-201ENST00000466002 277 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AC044810.1-201ENST00000480271 711 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AC005017.1-201ENST00000482002 490 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AC018797.1-201ENST00000510791 255 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AP000620.1-201ENST00000527147 504 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 NPIPB14P-203ENST00000532298 987 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 MEG8-217ENST00000556637 924 ntTSL 5 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AC068768.2-201ENST00000602352 343 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 MIR6721-201ENST00000617181 87 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AL512652.1-201ENST00000619006 500 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AC006213.5-201ENST00000619673 288 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AL357140.4-201ENST00000636827 412 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 RBMY1HP-201ENST00000382759 1389 ntBASIC6.53□□□□□ -1.36
LMO3Q8TAP4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
LMO3Q8TAP4 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.52□□□□□ -1.36
LMO3Q8TAP4 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AC027575.3-201ENST00000583058 2747 ntBASIC6.52□□□□□ -1.37
LMO3Q8TAP4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 GNG5P2-201ENST00000372054 207 ntBASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AL096711.1-201ENST00000404780 554 ntBASIC6.52□□□□□ -1.37
LMO3Q8TAP4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 SEPT14P12-201ENST00000442280 560 ntBASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 SUMO2P10-201ENST00000452006 288 ntBASIC6.52□□□□□ -1.37
LMO3Q8TAP4 YRDCP3-201ENST00000456507 480 ntBASIC6.52□□□□□ -1.37
LMO3Q8TAP4 CCDC11P1-201ENST00000503137 1162 ntBASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 OR7E158P-201ENST00000524483 910 ntBASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AC073389.3-201ENST00000609434 935 ntBASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 RFPL4AP6-201ENST00000616792 846 ntBASIC6.52□□□□□ -1.37
LMO3Q8TAP4 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AL355974.3-201ENST00000617383 467 ntBASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AC002044.3-201ENST00000623314 541 ntBASIC6.52□□□□□ -1.37
LMO3Q8TAP4 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.52□□□□□ -1.37
LMO3Q8TAP4 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms