Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 OR2AH1P-202ENST00000641232 2744 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 RN7SKP148-201ENST00000410179 275 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AL445183.3-201ENST00000414168 502 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AL449283.1-202ENST00000418249 604 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 RPP40P1-201ENST00000426762 456 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AC018804.1-201ENST00000430381 618 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 OR2L9P-201ENST00000444456 913 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AL096803.1-201ENST00000456921 1021 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 TPTE2P5-203ENST00000458118 728 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 PFN2-217ENST00000498307 556 ntTSL 4 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 RN7SKP11-201ENST00000517018 287 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 IGKV2D-38-201ENST00000518423 240 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 MRPS36P3-201ENST00000519284 130 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AC007537.1-201ENST00000539347 327 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AP005212.3-201ENST00000619964 528 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AC099786.3-201ENST00000565735 1410 ntBASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC6.81□□□□□ -1.32
TRIM48Q8IWZ4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 AC005839.1-201ENST00000624148 3213 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 MFSD8-213ENST00000641134 1327 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 AL390862.1-201ENST00000635467 1469 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 OR10D1P-201ENST00000355343 936 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 SEPT7P8-201ENST00000413308 775 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 RPS24P7-201ENST00000416921 246 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 GAPDHP16-201ENST00000448152 962 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 PPIAP32-201ENST00000449940 472 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 PRDX3P4-201ENST00000470828 747 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 AC134050.1-201ENST00000495088 933 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 AC113191.1-201ENST00000517759 403 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 AC131935.1-201ENST00000524621 333 ntBASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM48Q8IWZ4 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms