Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 AL050305.1-201ENST00000399993 1230 ntBASIC6.98□□□□□ -1.29
HERC6Q8IVU3 RN7SKP281-201ENST00000410472 352 ntBASIC6.98□□□□□ -1.29
HERC6Q8IVU3 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 PSMC1P2-201ENST00000423961 1204 ntBASIC6.98□□□□□ -1.29
HERC6Q8IVU3 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.98□□□□□ -1.29
HERC6Q8IVU3 RPL12P31-201ENST00000478433 450 ntBASIC6.98□□□□□ -1.29
HERC6Q8IVU3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 PRMT5P1-201ENST00000514351 598 ntBASIC6.98□□□□□ -1.29
HERC6Q8IVU3 RNA5SP340-201ENST00000517132 107 ntBASIC6.98□□□□□ -1.29
HERC6Q8IVU3 AC051619.2-201ENST00000559063 397 ntBASIC6.98□□□□□ -1.29
HERC6Q8IVU3 SNORA70D-201ENST00000578836 135 ntBASIC6.98□□□□□ -1.29
HERC6Q8IVU3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 RN7SL475P-201ENST00000583379 298 ntBASIC6.98□□□□□ -1.29
HERC6Q8IVU3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 NPIPB1P-202ENST00000588786 828 ntBASIC6.98□□□□□ -1.29
HERC6Q8IVU3 AC139493.1-201ENST00000604368 397 ntBASIC6.98□□□□□ -1.29
HERC6Q8IVU3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 THAP12P8-201ENST00000447914 2115 ntBASIC6.98□□□□□ -1.29
HERC6Q8IVU3 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HERC6Q8IVU3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AC110716.2-201ENST00000563865 3945 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 TMSB4XP4-201ENST00000323496 618 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 RAD1P2-201ENST00000446414 663 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 OR52Y1P-201ENST00000452418 828 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AC110749.1-201ENST00000462007 357 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 RN7SL273P-201ENST00000481561 299 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AL158068.1-201ENST00000506116 616 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AC095057.1-201ENST00000507583 168 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 KHDC1P1-201ENST00000511053 508 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AC106800.2-201ENST00000514009 1103 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 OR5H7P-201ENST00000514084 930 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 RN7SKP5-201ENST00000517045 272 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 TPRX1P1-201ENST00000557620 319 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 MRPS21P9-201ENST00000571150 257 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 PRELID3BP3-201ENST00000584963 545 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AC010333.3-201ENST00000615100 402 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AF117829.2-201ENST00000619538 361 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AC034229.6-201ENST00000623704 224 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AC074141.1-201ENST00000588129 2995 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 CYP2G2P-201ENST00000594920 1485 ntBASIC6.97□□□□□ -1.29
HERC6Q8IVU3 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
HERC6Q8IVU3 OR52B5P-204ENST00000641744 3467 ntBASIC6.96□□□□□ -1.29
HERC6Q8IVU3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms