Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 RPS27AP3-201ENST00000453803 454 ntBASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AC010343.2-201ENST00000510162 224 ntBASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AC093664.1-201ENST00000511779 289 ntBASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AL133399.1-201ENST00000527476 298 ntBASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 MIR3189-201ENST00000578735 73 ntBASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AL589863.1-201ENST00000595383 631 ntBASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 AC016542.2-201ENST00000624201 619 ntBASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 BX284613.1-201ENST00000452221 1641 ntBASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CCDC50Q8IVM0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AC092451.3-201ENST00000625067 1343 ntBASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 HSPE1P27-201ENST00000430808 296 ntBASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AL645939.3-201ENST00000435408 225 ntBASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 NPM1P23-201ENST00000440193 849 ntBASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 NPM1P9-201ENST00000453156 844 ntBASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 MTCO1P55-201ENST00000489829 745 ntBASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AC018645.1-201ENST00000505003 109 ntBASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AC009729.1-201ENST00000548873 1133 ntBASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 AC036176.3-201ENST00000602456 418 ntBASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC50Q8IVM0 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AC023632.6-201ENST00000624338 2177 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 CCNT2P1-201ENST00000423082 1315 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AC092692.1-201ENST00000623625 2595 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AC096921.2-201ENST00000561507 1916 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 GTF2IP4-201ENST00000453092 2054 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 RNU6-316P-201ENST00000391027 107 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 MIR1266-201ENST00000408125 84 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 NPM1P25-201ENST00000429734 854 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 RPL12P16-201ENST00000431098 498 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 GTF2IP14-201ENST00000441415 586 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 RPL7L1P3-201ENST00000455249 689 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 RANP2-201ENST00000456833 229 ntBASIC6.55□□□□□ -1.36
CCDC50Q8IVM0 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms