Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 OR4N3P-201ENST00000559395 818 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC007346.1-201ENST00000569208 867 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 RBM22P1-201ENST00000578589 1214 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC015688.2-201ENST00000584523 262 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AL020997.3-201ENST00000602843 359 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC005034.4-201ENST00000603612 899 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 CLPTM1LP1-201ENST00000604519 484 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC018618.2-201ENST00000604770 446 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC069545.1-201ENST00000605671 358 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AL121655.1-201ENST00000605811 308 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AL136985.2-201ENST00000607372 535 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 OR7M1P-201ENST00000608946 533 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC135050.6-202ENST00000613584 392 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC012150.2-201ENST00000621300 544 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC135068.4-201ENST00000622949 925 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC015726.3-201ENST00000624501 418 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC084782.1-201ENST00000564401 2465 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AL391380.1-201ENST00000439300 1432 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 KYNUP1-201ENST00000466683 1406 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 WNK1-220ENST00000574564 1401 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
ATG4DQ86TL0 TUBBP10-201ENST00000427668 1301 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 AC011477.1-204ENST00000623416 1325 ntBASIC6.75□□□□□ -1.33
ATG4DQ86TL0 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC100810.3-201ENST00000633189 2240 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 SOCS5P5-201ENST00000402732 1586 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 ZNF833P-201ENST00000424938 1494 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 FLJ42393-201ENST00000623801 2270 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 EEF1A1P26-201ENST00000458319 1363 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 RBMX2P2-201ENST00000257020 946 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 MT-TH-201ENST00000387441 69 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 NHP2P2-201ENST00000396362 460 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 BTF3P7-201ENST00000407097 488 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 RPL23AP85-201ENST00000421838 433 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 RPS27AP7-201ENST00000422792 455 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 ATP5HP2-201ENST00000433885 485 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 ATP5LP4-201ENST00000434169 307 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC244505.2-201ENST00000435089 759 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC114755.1-201ENST00000453101 868 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 RPL5P32-201ENST00000454085 879 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 CFTRP1-201ENST00000456646 183 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 RPS14P7-201ENST00000473701 448 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 ARL4AP1-201ENST00000503220 705 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 DSTNP2-201ENST00000504533 515 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC074344.1-201ENST00000512823 224 ntBASIC6.74□□□□□ -1.33
ATG4DQ86TL0 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms