Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AP003789.1-201ENST00000617737 605 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 SHQ1P1-201ENST00000437111 1544 ntBASIC6.2□□□□□ -1.42
ZNF549Q6P9A3 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 USP9YP3-201ENST00000434481 1766 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 RN7SKP121-201ENST00000410842 305 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC017035.1-201ENST00000411999 1115 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 HMGA1P8-201ENST00000414130 321 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 SETP10-201ENST00000424368 814 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC112492.2-201ENST00000432774 1030 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 RPEP4-201ENST00000437636 602 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AP000949.1-201ENST00000438328 629 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC016908.1-201ENST00000442571 1219 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 RBMY2AP-201ENST00000445405 1157 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 RBMY2CP-201ENST00000448575 1157 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 RBMY2DP-202ENST00000448881 1157 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 MARK2P8-201ENST00000476069 952 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 OR4D12P-201ENST00000509361 911 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 RNA5SP400-201ENST00000517155 111 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 RPA2P3-201ENST00000533268 770 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC124891.1-201ENST00000536322 519 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 TDGP1-201ENST00000543961 1229 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 DPPA3P2-201ENST00000553589 478 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC089999.3-201ENST00000622440 577 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 AC003992.1-201ENST00000635364 557 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 OR7A1P-202ENST00000641542 1158 ntBASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
ZNF549Q6P9A3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AC009831.5-201ENST00000624000 3189 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 SNORA64.3-201ENST00000365647 134 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AC083799.1-201ENST00000366451 910 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 OR6K3-202ENST00000368146 996 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AL360013.1-201ENST00000419031 858 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 OSTCP4-201ENST00000424397 449 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 KATNBL1P2-201ENST00000433311 835 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 EMC3-AS1-205ENST00000438698 534 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 SOCS5P1-201ENST00000440415 949 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AL133351.3-201ENST00000454998 193 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 RN7SL393P-201ENST00000463588 296 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 RN7SL326P-201ENST00000477493 296 ntBASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.18□□□□□ -1.42
ZNF549Q6P9A3 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms