Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 RNA5SP234-201ENST00000363916 119 ntBASIC6.01□□□□□ -1.45
RIF1Q5UIP0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 CEACAMP9-201ENST00000442990 513 ntBASIC6.01□□□□□ -1.45
RIF1Q5UIP0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 RPS4XP1-201ENST00000482189 787 ntBASIC6.01□□□□□ -1.45
RIF1Q5UIP0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 AC110775.1-201ENST00000513721 462 ntBASIC6.01□□□□□ -1.45
RIF1Q5UIP0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 MIR6837-201ENST00000620884 64 ntBASIC6.01□□□□□ -1.45
RIF1Q5UIP0 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 MRE11P1-201ENST00000464884 2127 ntBASIC6.01□□□□□ -1.45
RIF1Q5UIP0 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 RPS2P45-201ENST00000469997 2057 ntBASIC6.01□□□□□ -1.45
RIF1Q5UIP0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 AC127526.2-201ENST00000426436 775 ntBASIC6.01□□□□□ -1.45
RIF1Q5UIP0 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 AC110056.1-201ENST00000525759 911 ntBASIC6.01□□□□□ -1.45
RIF1Q5UIP0 AL049779.2-201ENST00000553847 315 ntBASIC6.01□□□□□ -1.45
RIF1Q5UIP0 OR7A11P-201ENST00000597719 953 ntBASIC6.01□□□□□ -1.45
RIF1Q5UIP0 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 AL353807.3-201ENST00000500626 2505 ntBASIC6.01□□□□□ -1.45
RIF1Q5UIP0 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
RIF1Q5UIP0 AL590004.4-201ENST00000566733 7060 ntBASIC6□□□□□ -1.45
RIF1Q5UIP0 NEK2P2-201ENST00000438441 1338 ntBASIC6□□□□□ -1.45
RIF1Q5UIP0 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6□□□□□ -1.45
RIF1Q5UIP0 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6□□□□□ -1.45
RIF1Q5UIP0 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
RIF1Q5UIP0 AL596448.1-201ENST00000415024 392 ntBASIC6□□□□□ -1.45
RIF1Q5UIP0 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6□□□□□ -1.45
RIF1Q5UIP0 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6□□□□□ -1.45
RIF1Q5UIP0 RPL23AP64-201ENST00000469465 435 ntBASIC6□□□□□ -1.45
RIF1Q5UIP0 RN7SL30P-201ENST00000488416 306 ntBASIC6□□□□□ -1.45
RIF1Q5UIP0 SNORA70.20-201ENST00000516848 126 ntBASIC6□□□□□ -1.45
RIF1Q5UIP0 AP000662.1-201ENST00000530952 487 ntBASIC6□□□□□ -1.45
RIF1Q5UIP0 AC096996.1-201ENST00000563813 325 ntBASIC6□□□□□ -1.45
RIF1Q5UIP0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6□□□□□ -1.45
RIF1Q5UIP0 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6□□□□□ -1.45
RIF1Q5UIP0 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6□□□□□ -1.45
RIF1Q5UIP0 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
RIF1Q5UIP0 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC6□□□□□ -1.45
RIF1Q5UIP0 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC6□□□□□ -1.45
RIF1Q5UIP0 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
RIF1Q5UIP0 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6□□□□□ -1.45
RIF1Q5UIP0 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6□□□□□ -1.45
RIF1Q5UIP0 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 AL603650.1-201ENST00000412680 240 ntBASIC6□□□□□ -1.45
RIF1Q5UIP0 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6□□□□□ -1.45
RIF1Q5UIP0 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6□□□□□ -1.45
RIF1Q5UIP0 AC083795.1-201ENST00000491760 320 ntBASIC6□□□□□ -1.45
RIF1Q5UIP0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6□□□□□ -1.45
RIF1Q5UIP0 IGKV1D-22-201ENST00000518953 324 ntBASIC6□□□□□ -1.45
RIF1Q5UIP0 FXNP1-201ENST00000555153 337 ntBASIC6□□□□□ -1.45
RIF1Q5UIP0 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6□□□□□ -1.45
RIF1Q5UIP0 FAM25E-202ENST00000608562 189 ntBASIC6□□□□□ -1.45
RIF1Q5UIP0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC6□□□□□ -1.45
RIF1Q5UIP0 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RIF1Q5UIP0 SELENOWP1-201ENST00000322792 252 ntBASIC5.99□□□□□ -1.45
RIF1Q5UIP0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms