Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
PTCH1Q13635 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
PTCH1Q13635 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PTCH1Q13635 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
PTCH1Q13635 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTCH1Q13635 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTCH1Q13635 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC8.51□□□□□ -1.05
PTCH1Q13635 AP002364.1-201ENST00000623330 3386 ntBASIC8.51□□□□□ -1.05
PTCH1Q13635 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTCH1Q13635 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTCH1Q13635 AC241584.2-201ENST00000637142 2090 ntBASIC8.51□□□□□ -1.05
PTCH1Q13635 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTCH1Q13635 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
PTCH1Q13635 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
PTCH1Q13635 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC8.51□□□□□ -1.05
PTCH1Q13635 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC8.51□□□□□ -1.05
PTCH1Q13635 AL096829.1-201ENST00000413677 457 ntBASIC8.51□□□□□ -1.05
PTCH1Q13635 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PTCH1Q13635 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.51□□□□□ -1.05
PTCH1Q13635 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC8.51□□□□□ -1.05
PTCH1Q13635 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC8.51□□□□□ -1.05
PTCH1Q13635 AL139415.1-201ENST00000424862 352 ntBASIC8.51□□□□□ -1.05
PTCH1Q13635 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC8.51□□□□□ -1.05
PTCH1Q13635 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC8.51□□□□□ -1.05
PTCH1Q13635 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC8.51□□□□□ -1.05
PTCH1Q13635 RN7SL826P-201ENST00000479724 288 ntBASIC8.51□□□□□ -1.05
PTCH1Q13635 AC114728.1-201ENST00000488289 483 ntBASIC8.51□□□□□ -1.05
PTCH1Q13635 NPM1P27-201ENST00000502784 830 ntBASIC8.51□□□□□ -1.05
PTCH1Q13635 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PTCH1Q13635 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.51□□□□□ -1.05
PTCH1Q13635 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC8.51□□□□□ -1.05
PTCH1Q13635 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC8.51□□□□□ -1.05
PTCH1Q13635 AC116651.1-201ENST00000609724 556 ntBASIC8.51□□□□□ -1.05
PTCH1Q13635 AL035661.1-201ENST00000620459 1144 ntBASIC8.51□□□□□ -1.05
PTCH1Q13635 RAD17P2-201ENST00000451754 1977 ntBASIC8.51□□□□□ -1.05
PTCH1Q13635 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PTCH1Q13635 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
PTCH1Q13635 CR383656.5-201ENST00000547616 1340 ntBASIC8.51□□□□□ -1.05
PTCH1Q13635 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTCH1Q13635 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
PTCH1Q13635 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
PTCH1Q13635 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTCH1Q13635 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
PTCH1Q13635 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
PTCH1Q13635 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTCH1Q13635 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTCH1Q13635 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.5□□□□□ -1.05
PTCH1Q13635 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTCH1Q13635 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTCH1Q13635 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC8.5□□□□□ -1.05
PTCH1Q13635 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC8.5□□□□□ -1.05
PTCH1Q13635 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTCH1Q13635 SNORA70-201ENST00000384436 135 ntBASIC8.5□□□□□ -1.05
PTCH1Q13635 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC8.5□□□□□ -1.05
PTCH1Q13635 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC8.5□□□□□ -1.05
PTCH1Q13635 AC009237.1-201ENST00000442127 744 ntBASIC8.5□□□□□ -1.05
PTCH1Q13635 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC8.5□□□□□ -1.05
PTCH1Q13635 AC006499.3-201ENST00000506077 748 ntBASIC8.5□□□□□ -1.05
PTCH1Q13635 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC8.5□□□□□ -1.05
PTCH1Q13635 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC8.5□□□□□ -1.05
PTCH1Q13635 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.5□□□□□ -1.05
PTCH1Q13635 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC8.5□□□□□ -1.05
PTCH1Q13635 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.5□□□□□ -1.05
PTCH1Q13635 AL445670.1-201ENST00000618889 801 ntBASIC8.5□□□□□ -1.05
PTCH1Q13635 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTCH1Q13635 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
PTCH1Q13635 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.5□□□□□ -1.05
PTCH1Q13635 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.5□□□□□ -1.05
PTCH1Q13635 CCNT2P1-201ENST00000423082 1315 ntBASIC8.5□□□□□ -1.05
PTCH1Q13635 AC235565.1-201ENST00000456962 1325 ntBASIC8.5□□□□□ -1.05
PTCH1Q13635 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTCH1Q13635 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PTCH1Q13635 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
PTCH1Q13635 AC105235.1-201ENST00000623208 1816 ntBASIC8.49□□□□□ -1.05
PTCH1Q13635 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PTCH1Q13635 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.49□□□□□ -1.05
PTCH1Q13635 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
PTCH1Q13635 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
PTCH1Q13635 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
PTCH1Q13635 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
PTCH1Q13635 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.49□□□□□ -1.05
PTCH1Q13635 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC8.49□□□□□ -1.05
PTCH1Q13635 RNU11-6P-201ENST00000391127 133 ntBASIC8.49□□□□□ -1.05
PTCH1Q13635 NPM1P4-201ENST00000414095 812 ntBASIC8.49□□□□□ -1.05
PTCH1Q13635 UBE2V1P14-201ENST00000415815 558 ntBASIC8.49□□□□□ -1.05
PTCH1Q13635 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC8.49□□□□□ -1.05
PTCH1Q13635 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC8.49□□□□□ -1.05
PTCH1Q13635 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC8.49□□□□□ -1.05
PTCH1Q13635 RN7SL727P-201ENST00000482164 296 ntBASIC8.49□□□□□ -1.05
PTCH1Q13635 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC8.49□□□□□ -1.05
PTCH1Q13635 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC8.49□□□□□ -1.05
PTCH1Q13635 AC006530.1-201ENST00000555980 571 ntBASIC8.49□□□□□ -1.05
PTCH1Q13635 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC8.49□□□□□ -1.05
PTCH1Q13635 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC8.49□□□□□ -1.05
PTCH1Q13635 MIR5095-201ENST00000578844 88 ntBASIC8.49□□□□□ -1.05
PTCH1Q13635 AC141002.1-201ENST00000607025 279 ntBASIC8.49□□□□□ -1.05
PTCH1Q13635 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
PTCH1Q13635 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.49□□□□□ -1.05
PTCH1Q13635 CTNNA1P1-201ENST00000515849 2728 ntBASIC8.49□□□□□ -1.05
PTCH1Q13635 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms