Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL590032.1-201ENST00000604920 252 ntBASIC6.3□□□□□ -1.4
CBX1P83916 AL133481.2-203ENST00000607558 139 ntBASIC6.3□□□□□ -1.4
CBX1P83916 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.3□□□□□ -1.4
CBX1P83916 AC006924.1-201ENST00000610750 559 ntBASIC6.3□□□□□ -1.4
CBX1P83916 RN7SL820P-201ENST00000616437 299 ntBASIC6.3□□□□□ -1.4
CBX1P83916 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 AL449283.1-201ENST00000602631 3403 ntBASIC6.3□□□□□ -1.4
CBX1P83916 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CBX1P83916 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CBX1P83916 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CBX1P83916 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CBX1P83916 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CBX1P83916 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.3□□□□□ -1.4
CBX1P83916 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.3□□□□□ -1.4
CBX1P83916 AC007938.2-201ENST00000604666 2634 ntBASIC6.29□□□□□ -1.4
CBX1P83916 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.29□□□□□ -1.4
CBX1P83916 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CBX1P83916 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.29□□□□□ -1.4
CBX1P83916 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CBX1P83916 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CBX1P83916 AC009962.1-201ENST00000567327 3813 ntBASIC6.29□□□□□ -1.4
CBX1P83916 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.29□□□□□ -1.4
CBX1P83916 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CBX1P83916 ZNF806-201ENST00000438300 1774 ntBASIC6.29□□□□□ -1.4
CBX1P83916 AC139426.3-201ENST00000605648 2059 ntBASIC6.29□□□□□ -1.4
CBX1P83916 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CBX1P83916 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CBX1P83916 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CBX1P83916 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CBX1P83916 EI24P3-201ENST00000399046 1062 ntBASIC6.29□□□□□ -1.4
CBX1P83916 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.29□□□□□ -1.4
CBX1P83916 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.29□□□□□ -1.4
CBX1P83916 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC6.29□□□□□ -1.4
CBX1P83916 AC009784.1-201ENST00000426484 460 ntBASIC6.29□□□□□ -1.4
CBX1P83916 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.29□□□□□ -1.4
CBX1P83916 AC009299.1-201ENST00000429684 717 ntBASIC6.29□□□□□ -1.4
CBX1P83916 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.29□□□□□ -1.4
CBX1P83916 FTLP17-201ENST00000432567 525 ntBASIC6.29□□□□□ -1.4
CBX1P83916 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.29□□□□□ -1.4
CBX1P83916 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.29□□□□□ -1.4
CBX1P83916 FRG2FP-204ENST00000453982 852 ntBASIC6.29□□□□□ -1.4
CBX1P83916 AC117392.1-201ENST00000487061 596 ntBASIC6.29□□□□□ -1.4
CBX1P83916 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.29□□□□□ -1.4
CBX1P83916 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.29□□□□□ -1.4
CBX1P83916 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.29□□□□□ -1.4
CBX1P83916 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
CBX1P83916 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC6.29□□□□□ -1.4
CBX1P83916 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.29□□□□□ -1.4
CBX1P83916 AC233290.1-201ENST00000553021 1186 ntBASIC6.29□□□□□ -1.4
CBX1P83916 FXYD6P1-201ENST00000604857 285 ntBASIC6.29□□□□□ -1.4
CBX1P83916 AL353729.2-201ENST00000605859 1249 ntBASIC6.29□□□□□ -1.4
CBX1P83916 RN7SL778P-201ENST00000607160 297 ntBASIC6.29□□□□□ -1.4
CBX1P83916 AC097641.3-201ENST00000613523 464 ntBASIC6.29□□□□□ -1.4
CBX1P83916 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
CBX1P83916 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC6.29□□□□□ -1.4
CBX1P83916 AC024884.1-201ENST00000620583 399 ntBASIC6.29□□□□□ -1.4
CBX1P83916 KDM5DP1-201ENST00000622542 298 ntBASIC6.29□□□□□ -1.4
CBX1P83916 AC103703.1-201ENST00000634783 663 ntBASIC6.29□□□□□ -1.4
CBX1P83916 CCNT1-206ENST00000640148 596 ntTSL 5 BASIC6.29□□□□□ -1.4
CBX1P83916 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.29□□□□□ -1.4
CBX1P83916 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.29□□□□□ -1.4
CBX1P83916 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CBX1P83916 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CBX1P83916 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CBX1P83916 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CBX1P83916 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CBX1P83916 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CBX1P83916 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CBX1P83916 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC6.28□□□□□ -1.4
CBX1P83916 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.28□□□□□ -1.4
CBX1P83916 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CBX1P83916 AC119674.1-202ENST00000641333 1860 ntBASIC6.28□□□□□ -1.4
CBX1P83916 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CBX1P83916 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CBX1P83916 AC019072.1-201ENST00000604535 1551 ntBASIC6.28□□□□□ -1.4
CBX1P83916 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CBX1P83916 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
CBX1P83916 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CBX1P83916 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CBX1P83916 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CBX1P83916 RN7SKP74-201ENST00000362849 309 ntBASIC6.28□□□□□ -1.4
CBX1P83916 RNA5SP474-201ENST00000391234 90 ntBASIC6.28□□□□□ -1.4
CBX1P83916 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CBX1P83916 AL359694.1-201ENST00000403247 604 ntBASIC6.28□□□□□ -1.4
CBX1P83916 NPM1P40-201ENST00000412758 733 ntBASIC6.28□□□□□ -1.4
CBX1P83916 AC245096.1-201ENST00000413104 546 ntBASIC6.28□□□□□ -1.4
CBX1P83916 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC6.28□□□□□ -1.4
CBX1P83916 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.28□□□□□ -1.4
CBX1P83916 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CBX1P83916 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC6.28□□□□□ -1.4
CBX1P83916 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.28□□□□□ -1.4
CBX1P83916 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.28□□□□□ -1.4
CBX1P83916 RPL5P14-201ENST00000494197 878 ntBASIC6.28□□□□□ -1.4
CBX1P83916 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.28□□□□□ -1.4
CBX1P83916 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.28□□□□□ -1.4
CBX1P83916 AL117192.1-204ENST00000553485 449 ntTSL 2 BASIC6.28□□□□□ -1.4
CBX1P83916 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.28□□□□□ -1.4
CBX1P83916 FRG2IP-201ENST00000563581 781 ntBASIC6.28□□□□□ -1.4
CBX1P83916 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 1619.7 ms