Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 RN7SKP184-201ENST00000362348 333 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 RNA5SP308-201ENST00000362532 115 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 PPIAP26-201ENST00000377951 522 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AL590635.1-201ENST00000406314 586 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 TMA16P2-201ENST00000413187 601 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AC013403.1-201ENST00000436954 263 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A1P61619 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AC064862.5-201ENST00000440618 334 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 SEPT14P12-201ENST00000442280 560 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 PFN1P11-201ENST00000445829 389 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AL034369.1-201ENST00000453808 477 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A1P61619 YRDCP3-201ENST00000456507 480 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 SULT1D1P-201ENST00000458020 882 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 SNRPCP11-201ENST00000492453 205 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.66□□□□□ -1.5
SEC61A1P61619 SNX18P23-201ENST00000510867 677 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 MINOS1P4-201ENST00000515470 318 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.66□□□□□ -1.5
SEC61A1P61619 IGLV3-6-201ENST00000523937 250 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SEC61A1P61619 OR4R2P-201ENST00000530815 597 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A1P61619 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AL590032.1-201ENST00000604920 252 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.66□□□□□ -1.5
SEC61A1P61619 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.66□□□□□ -1.5
SEC61A1P61619 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 AP002512.4-202ENST00000641599 4530 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 AC027279.1-201ENST00000568885 4284 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A1P61619 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 AC010132.4-201ENST00000569883 1368 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 AC096992.2-201ENST00000609553 1684 ntBASIC5.66□□□□□ -1.5
SEC61A1P61619 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A1P61619 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.65□□□□□ -1.5
SEC61A1P61619 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SEC61A1P61619 ZNF806-201ENST00000438300 1774 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A1P61619 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A1P61619 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC092724.1-201ENST00000624623 3397 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.65□□□□□ -1.5
SEC61A1P61619 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A1P61619 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.65□□□□□ -1.5
SEC61A1P61619 RNU1-5P-201ENST00000362684 144 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AL663061.1-201ENST00000416625 580 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AL139415.1-201ENST00000424862 352 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AC239367.3-201ENST00000428996 814 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A1P61619 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC009963.4-201ENST00000448535 339 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.65□□□□□ -1.5
SEC61A1P61619 MGAT2P1-201ENST00000449718 797 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.65□□□□□ -1.5
SEC61A1P61619 NACAP5-201ENST00000509863 636 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.65□□□□□ -1.5
SEC61A1P61619 RN7SKP5-201ENST00000517045 272 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.65□□□□□ -1.5
SEC61A1P61619 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.65□□□□□ -1.5
SEC61A1P61619 BTG1P1-201ENST00000540396 508 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AC007068.2-201ENST00000543168 395 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.65□□□□□ -1.5
SEC61A1P61619 AC007494.1-201ENST00000562293 760 ntBASIC5.65□□□□□ -1.5
SEC61A1P61619 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms