Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC8.1□□□□□ -1.11
RIPK4P57078 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC8.1□□□□□ -1.11
RIPK4P57078 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RIPK4P57078 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.1□□□□□ -1.11
RIPK4P57078 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC8.1□□□□□ -1.11
RIPK4P57078 TTC41P-205ENST00000551270 3963 ntBASIC8.1□□□□□ -1.11
RIPK4P57078 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8.1□□□□□ -1.11
RIPK4P57078 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RIPK4P57078 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC8.1□□□□□ -1.11
RIPK4P57078 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RIPK4P57078 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RIPK4P57078 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
RIPK4P57078 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
RIPK4P57078 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RIPK4P57078 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
RIPK4P57078 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RIPK4P57078 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RIPK4P57078 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.09□□□□□ -1.11
RIPK4P57078 AC092692.1-201ENST00000623625 2595 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RIPK4P57078 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RIPK4P57078 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
RIPK4P57078 RNU1-134P-201ENST00000362935 165 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 MIR621-201ENST00000384919 96 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 MIR130B-202ENST00000385018 82 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 RAB5CP1-201ENST00000395972 580 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 SNORA11.5-201ENST00000408163 128 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 SNORA77.2-201ENST00000408571 112 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 RNA5SP156-201ENST00000410250 110 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC8.09□□□□□ -1.11
RIPK4P57078 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC8.09□□□□□ -1.11
RIPK4P57078 AC130360.1-201ENST00000425489 1117 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 AC069154.1-201ENST00000432914 542 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 AL138899.2-201ENST00000439139 499 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC8.09□□□□□ -1.11
RIPK4P57078 AC009963.3-201ENST00000458090 486 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 AL158068.1-201ENST00000506116 616 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC8.09□□□□□ -1.11
RIPK4P57078 RN7SKP70-201ENST00000516655 271 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 AC130365.2-201ENST00000525882 1201 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC8.09□□□□□ -1.11
RIPK4P57078 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC8.09□□□□□ -1.11
RIPK4P57078 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC8.09□□□□□ -1.11
RIPK4P57078 AL683813.2-201ENST00000605245 502 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC8.09□□□□□ -1.11
RIPK4P57078 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
RIPK4P57078 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC8.09□□□□□ -1.11
RIPK4P57078 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RIPK4P57078 CAP1P2-201ENST00000417455 1409 ntBASIC8.09□□□□□ -1.11
RIPK4P57078 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
RIPK4P57078 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.09□□□□□ -1.11
RIPK4P57078 AC119674.1-202ENST00000641333 1860 ntBASIC8.09□□□□□ -1.12
RIPK4P57078 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
RIPK4P57078 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
RIPK4P57078 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RIPK4P57078 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RIPK4P57078 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
RIPK4P57078 COX6B1P3-201ENST00000312310 260 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 AL353626.3-201ENST00000413399 657 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC8.08□□□□□ -1.12
RIPK4P57078 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC8.08□□□□□ -1.12
RIPK4P57078 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC8.08□□□□□ -1.12
RIPK4P57078 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC8.08□□□□□ -1.12
RIPK4P57078 RBMY2AP-201ENST00000445405 1157 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 RBMY2CP-201ENST00000448575 1157 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 RBMY2DP-202ENST00000448881 1157 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 RBMY2BP-202ENST00000451071 1156 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 LDHAP1-201ENST00000509421 992 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC8.08□□□□□ -1.12
RIPK4P57078 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC8.08□□□□□ -1.12
RIPK4P57078 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
RIPK4P57078 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
RIPK4P57078 AC141002.1-201ENST00000607025 279 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 AC092266.1-201ENST00000610958 165 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 RN7SL261P-201ENST00000613441 282 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 AC004801.6-201ENST00000616571 978 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 AC003992.1-201ENST00000635364 557 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RIPK4P57078 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
RIPK4P57078 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC8.08□□□□□ -1.12
RIPK4P57078 AC093225.1-201ENST00000506867 1408 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RIPK4P57078 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RIPK4P57078 LYARP1-201ENST00000436977 1501 ntBASIC8.08□□□□□ -1.12
RIPK4P57078 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.08□□□□□ -1.12
RIPK4P57078 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
RIPK4P57078 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
RIPK4P57078 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
RIPK4P57078 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.07□□□□□ -1.12
RIPK4P57078 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RIPK4P57078 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RIPK4P57078 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC8.07□□□□□ -1.12
RIPK4P57078 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
RIPK4P57078 RPL35AP31-201ENST00000418340 337 ntBASIC8.07□□□□□ -1.12
RIPK4P57078 ATP5A1P8-201ENST00000423669 1291 ntBASIC8.07□□□□□ -1.12
RIPK4P57078 AC115283.1-201ENST00000427353 400 ntBASIC8.07□□□□□ -1.12
RIPK4P57078 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC8.07□□□□□ -1.12
RIPK4P57078 TOMM20P1-201ENST00000534518 427 ntBASIC8.07□□□□□ -1.12
RIPK4P57078 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC8.07□□□□□ -1.12
RIPK4P57078 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms