Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PKNOX1P55347 KHDC1P1-201ENST00000511053 508 ntBASIC6.03□□□□□ -1.44
PKNOX1P55347 SLC25A51P2-201ENST00000535708 889 ntBASIC6.03□□□□□ -1.44
PKNOX1P55347 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.03□□□□□ -1.44
PKNOX1P55347 AC008055.1-201ENST00000547032 609 ntBASIC6.03□□□□□ -1.44
PKNOX1P55347 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.03□□□□□ -1.44
PKNOX1P55347 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.03□□□□□ -1.44
PKNOX1P55347 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.03□□□□□ -1.44
PKNOX1P55347 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.03□□□□□ -1.44
PKNOX1P55347 AC036176.3-201ENST00000602456 418 ntBASIC6.03□□□□□ -1.44
PKNOX1P55347 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.03□□□□□ -1.44
PKNOX1P55347 AL512413.1-201ENST00000606489 382 ntBASIC6.03□□□□□ -1.44
PKNOX1P55347 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.03□□□□□ -1.44
PKNOX1P55347 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.03□□□□□ -1.44
PKNOX1P55347 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PKNOX1P55347 AC079248.1-201ENST00000427568 1546 ntBASIC6.03□□□□□ -1.44
PKNOX1P55347 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PKNOX1P55347 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.03□□□□□ -1.44
PKNOX1P55347 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PKNOX1P55347 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PKNOX1P55347 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PKNOX1P55347 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PKNOX1P55347 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PKNOX1P55347 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PKNOX1P55347 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.02□□□□□ -1.44
PKNOX1P55347 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.44
PKNOX1P55347 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.02□□□□□ -1.44
PKNOX1P55347 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
PKNOX1P55347 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PKNOX1P55347 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PKNOX1P55347 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PKNOX1P55347 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.02□□□□□ -1.45
PKNOX1P55347 MIR431-201ENST00000385266 114 ntBASIC6.02□□□□□ -1.45
PKNOX1P55347 AL033519.1-201ENST00000407266 307 ntBASIC6.02□□□□□ -1.45
PKNOX1P55347 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
PKNOX1P55347 AL590399.2-201ENST00000427536 309 ntBASIC6.02□□□□□ -1.45
PKNOX1P55347 SOCS5P1-201ENST00000440415 949 ntBASIC6.02□□□□□ -1.45
PKNOX1P55347 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.02□□□□□ -1.45
PKNOX1P55347 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.02□□□□□ -1.45
PKNOX1P55347 AC073594.1-201ENST00000462065 364 ntBASIC6.02□□□□□ -1.45
PKNOX1P55347 AP003385.3-201ENST00000472498 287 ntBASIC6.02□□□□□ -1.45
PKNOX1P55347 RPL12P31-201ENST00000478433 450 ntBASIC6.02□□□□□ -1.45
PKNOX1P55347 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.02□□□□□ -1.45
PKNOX1P55347 AC090058.1-201ENST00000498788 435 ntBASIC6.02□□□□□ -1.45
PKNOX1P55347 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.02□□□□□ -1.45
PKNOX1P55347 AC114324.2-202ENST00000503812 134 ntBASIC6.02□□□□□ -1.45
PKNOX1P55347 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PKNOX1P55347 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.02□□□□□ -1.45
PKNOX1P55347 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.02□□□□□ -1.45
PKNOX1P55347 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.02□□□□□ -1.45
PKNOX1P55347 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.02□□□□□ -1.45
PKNOX1P55347 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.02□□□□□ -1.45
PKNOX1P55347 AL008582.1-201ENST00000609612 442 ntBASIC6.02□□□□□ -1.45
PKNOX1P55347 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.02□□□□□ -1.45
PKNOX1P55347 MIR6070-201ENST00000613967 103 ntBASIC6.02□□□□□ -1.45
PKNOX1P55347 MIR6503-201ENST00000622884 86 ntBASIC6.02□□□□□ -1.45
PKNOX1P55347 AC091059.2-201ENST00000623355 614 ntBASIC6.02□□□□□ -1.45
PKNOX1P55347 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PKNOX1P55347 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PKNOX1P55347 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
PKNOX1P55347 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PKNOX1P55347 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PKNOX1P55347 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PKNOX1P55347 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
PKNOX1P55347 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PKNOX1P55347 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.01□□□□□ -1.45
PKNOX1P55347 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
PKNOX1P55347 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
PKNOX1P55347 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PKNOX1P55347 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
PKNOX1P55347 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PKNOX1P55347 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PKNOX1P55347 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PKNOX1P55347 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
PKNOX1P55347 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.01□□□□□ -1.45
PKNOX1P55347 SNORD94-201ENST00000386037 137 ntBASIC6.01□□□□□ -1.45
PKNOX1P55347 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PKNOX1P55347 RN7SKP121-201ENST00000410842 305 ntBASIC6.01□□□□□ -1.45
PKNOX1P55347 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.01□□□□□ -1.45
PKNOX1P55347 DHFRP2-201ENST00000414224 547 ntBASIC6.01□□□□□ -1.45
PKNOX1P55347 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.01□□□□□ -1.45
PKNOX1P55347 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.01□□□□□ -1.45
PKNOX1P55347 TRGV5P-201ENST00000419915 354 ntBASIC6.01□□□□□ -1.45
PKNOX1P55347 GAPDHP23-201ENST00000444823 993 ntBASIC6.01□□□□□ -1.45
PKNOX1P55347 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.01□□□□□ -1.45
PKNOX1P55347 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.01□□□□□ -1.45
PKNOX1P55347 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.01□□□□□ -1.45
PKNOX1P55347 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.01□□□□□ -1.45
PKNOX1P55347 RN7SL790P-201ENST00000474043 298 ntBASIC6.01□□□□□ -1.45
PKNOX1P55347 OR4D12P-201ENST00000509361 911 ntBASIC6.01□□□□□ -1.45
PKNOX1P55347 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.01□□□□□ -1.45
PKNOX1P55347 AP001858.2-201ENST00000536213 601 ntBASIC6.01□□□□□ -1.45
PKNOX1P55347 AC023310.2-201ENST00000553844 547 ntBASIC6.01□□□□□ -1.45
PKNOX1P55347 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.01□□□□□ -1.45
PKNOX1P55347 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.01□□□□□ -1.45
PKNOX1P55347 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.01□□□□□ -1.45
PKNOX1P55347 AL137067.2-201ENST00000621202 131 ntBASIC6.01□□□□□ -1.45
PKNOX1P55347 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.01□□□□□ -1.45
PKNOX1P55347 CLUHP10-201ENST00000631979 980 ntBASIC6.01□□□□□ -1.45
PKNOX1P55347 OR7A1P-202ENST00000641542 1158 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms