Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RN7SL70P-201ENST00000478322 302 ntBASIC5.91□□□□□ -1.46
CDH12P55289 DEFB109A-201ENST00000482450 265 ntBASIC5.91□□□□□ -1.46
CDH12P55289 AOX3P-204ENST00000491025 2107 ntBASIC5.91□□□□□ -1.46
CDH12P55289 NPM1P28-201ENST00000492269 840 ntBASIC5.91□□□□□ -1.46
CDH12P55289 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH12P55289 AC131392.1-201ENST00000506490 633 ntBASIC5.91□□□□□ -1.46
CDH12P55289 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CDH12P55289 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH12P55289 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.91□□□□□ -1.46
CDH12P55289 SCARNA11.1-201ENST00000516918 132 ntBASIC5.91□□□□□ -1.46
CDH12P55289 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH12P55289 AC025423.2-201ENST00000537570 439 ntBASIC5.91□□□□□ -1.46
CDH12P55289 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.91□□□□□ -1.46
CDH12P55289 AC012414.2-201ENST00000559474 187 ntBASIC5.91□□□□□ -1.46
CDH12P55289 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 BNIP3P39-201ENST00000601077 554 ntBASIC5.91□□□□□ -1.46
CDH12P55289 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH12P55289 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 AL512506.1-201ENST00000613918 449 ntBASIC5.91□□□□□ -1.46
CDH12P55289 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.91□□□□□ -1.46
CDH12P55289 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH12P55289 AL356490.1-201ENST00000623079 479 ntBASIC5.91□□□□□ -1.46
CDH12P55289 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH12P55289 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH12P55289 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.91□□□□□ -1.46
CDH12P55289 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.91□□□□□ -1.46
CDH12P55289 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH12P55289 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
CDH12P55289 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.91□□□□□ -1.46
CDH12P55289 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH12P55289 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.91□□□□□ -1.46
CDH12P55289 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 AP003486.1-201ENST00000525716 3994 ntBASIC5.91□□□□□ -1.46
CDH12P55289 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CDH12P55289 AC009220.2-201ENST00000489759 1751 ntBASIC5.9□□□□□ -1.46
CDH12P55289 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH12P55289 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.9□□□□□ -1.46
CDH12P55289 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CDH12P55289 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
CDH12P55289 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH12P55289 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CDH12P55289 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
CDH12P55289 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH12P55289 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH12P55289 MAPK10-287ENST00000641217 3037 ntBASIC5.9□□□□□ -1.46
CDH12P55289 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH12P55289 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.9□□□□□ -1.46
CDH12P55289 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.9□□□□□ -1.46
CDH12P55289 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
CDH12P55289 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
CDH12P55289 U3.52-201ENST00000384034 216 ntBASIC5.9□□□□□ -1.46
CDH12P55289 MIR7-1-201ENST00000384871 110 ntBASIC5.9□□□□□ -1.46
CDH12P55289 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CDH12P55289 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.9□□□□□ -1.46
CDH12P55289 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH12P55289 AC083855.1-201ENST00000440041 258 ntBASIC5.9□□□□□ -1.46
CDH12P55289 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH12P55289 AC079922.1-201ENST00000443291 359 ntBASIC5.9□□□□□ -1.46
CDH12P55289 AC009244.1-201ENST00000450566 258 ntBASIC5.9□□□□□ -1.46
CDH12P55289 AC022080.2-201ENST00000452932 533 ntBASIC5.9□□□□□ -1.46
CDH12P55289 RN7SL372P-201ENST00000461982 298 ntBASIC5.9□□□□□ -1.46
CDH12P55289 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH12P55289 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH12P55289 AC106800.3-201ENST00000511389 308 ntBASIC5.9□□□□□ -1.46
CDH12P55289 RNA5SP75-201ENST00000516841 111 ntBASIC5.9□□□□□ -1.46
CDH12P55289 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.9□□□□□ -1.46
CDH12P55289 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH12P55289 OR4R2P-201ENST00000530815 597 ntBASIC5.9□□□□□ -1.46
CDH12P55289 AP002004.1-206ENST00000532441 876 ntBASIC5.9□□□□□ -1.46
CDH12P55289 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH12P55289 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.9□□□□□ -1.46
CDH12P55289 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH12P55289 AC026956.1-201ENST00000558741 396 ntBASIC5.9□□□□□ -1.46
CDH12P55289 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.9□□□□□ -1.46
CDH12P55289 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.9□□□□□ -1.46
CDH12P55289 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH12P55289 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.9□□□□□ -1.46
CDH12P55289 AC021766.1-201ENST00000624404 741 ntBASIC5.9□□□□□ -1.46
CDH12P55289 AL590396.2-201ENST00000636511 1041 ntBASIC5.9□□□□□ -1.46
CDH12P55289 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CDH12P55289 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CDH12P55289 THAP12P8-201ENST00000447914 2115 ntBASIC5.9□□□□□ -1.47
CDH12P55289 SNX18P3-202ENST00000565670 1750 ntBASIC5.9□□□□□ -1.47
CDH12P55289 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
CDH12P55289 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
CDH12P55289 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.9□□□□□ -1.47
CDH12P55289 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
CDH12P55289 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
CDH12P55289 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH12P55289 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms