Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.39□□□□□ -1.39
CDH4P55283 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH4P55283 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH4P55283 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH4P55283 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH4P55283 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.39□□□□□ -1.39
CDH4P55283 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CDH4P55283 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH4P55283 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
CDH4P55283 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH4P55283 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.39□□□□□ -1.39
CDH4P55283 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.39□□□□□ -1.39
CDH4P55283 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.38□□□□□ -1.39
CDH4P55283 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CDH4P55283 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH4P55283 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH4P55283 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH4P55283 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH4P55283 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
CDH4P55283 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH4P55283 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.38□□□□□ -1.39
CDH4P55283 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CDH4P55283 SNORA43.1-201ENST00000364863 140 ntBASIC6.38□□□□□ -1.39
CDH4P55283 VN1R12P-201ENST00000403778 876 ntBASIC6.38□□□□□ -1.39
CDH4P55283 RNA5SP431-201ENST00000410312 120 ntBASIC6.38□□□□□ -1.39
CDH4P55283 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.38□□□□□ -1.39
CDH4P55283 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.38□□□□□ -1.39
CDH4P55283 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH4P55283 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.38□□□□□ -1.39
CDH4P55283 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.38□□□□□ -1.39
CDH4P55283 OR52E7P-201ENST00000452394 933 ntBASIC6.38□□□□□ -1.39
CDH4P55283 RPL37P23-201ENST00000492641 294 ntBASIC6.38□□□□□ -1.39
CDH4P55283 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH4P55283 OR7E99P-201ENST00000505750 922 ntBASIC6.38□□□□□ -1.39
CDH4P55283 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.38□□□□□ -1.39
CDH4P55283 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.38□□□□□ -1.39
CDH4P55283 AC006512.2-201ENST00000543250 486 ntBASIC6.38□□□□□ -1.39
CDH4P55283 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH4P55283 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.38□□□□□ -1.39
CDH4P55283 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH4P55283 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH4P55283 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH4P55283 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.38□□□□□ -1.39
CDH4P55283 NPIPB1P-202ENST00000588786 828 ntBASIC6.38□□□□□ -1.39
CDH4P55283 AC022106.1-201ENST00000612834 766 ntBASIC6.38□□□□□ -1.39
CDH4P55283 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.38□□□□□ -1.39
CDH4P55283 EIF3EP1-201ENST00000433978 1316 ntBASIC6.38□□□□□ -1.39
CDH4P55283 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH4P55283 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH4P55283 AC018717.1-201ENST00000457712 1505 ntBASIC6.38□□□□□ -1.39
CDH4P55283 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH4P55283 SNX18P3-202ENST00000565670 1750 ntBASIC6.38□□□□□ -1.39
CDH4P55283 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.38□□□□□ -1.39
CDH4P55283 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CDH4P55283 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CDH4P55283 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CDH4P55283 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CDH4P55283 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH4P55283 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
CDH4P55283 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 AC009779.8-201ENST00000641684 4384 ntBASIC6.37□□□□□ -1.39
CDH4P55283 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH4P55283 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH4P55283 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH4P55283 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 AC112243.1-201ENST00000623949 3851 ntBASIC6.37□□□□□ -1.39
CDH4P55283 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH4P55283 SEPT7P2-202ENST00000398921 823 ntBASIC6.37□□□□□ -1.39
CDH4P55283 AC130360.1-201ENST00000425489 1117 ntBASIC6.37□□□□□ -1.39
CDH4P55283 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH4P55283 GAPDHP23-201ENST00000444823 993 ntBASIC6.37□□□□□ -1.39
CDH4P55283 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.37□□□□□ -1.39
CDH4P55283 AL022237.1-201ENST00000446663 358 ntBASIC6.37□□□□□ -1.39
CDH4P55283 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH4P55283 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.37□□□□□ -1.39
CDH4P55283 RN7SKP70-201ENST00000516655 271 ntBASIC6.37□□□□□ -1.39
CDH4P55283 AC009879.1-201ENST00000520029 839 ntBASIC6.37□□□□□ -1.39
CDH4P55283 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.37□□□□□ -1.39
CDH4P55283 AC130365.2-201ENST00000525882 1201 ntBASIC6.37□□□□□ -1.39
CDH4P55283 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.37□□□□□ -1.39
CDH4P55283 AC092865.1-201ENST00000544395 1023 ntBASIC6.37□□□□□ -1.39
CDH4P55283 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH4P55283 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.37□□□□□ -1.39
CDH4P55283 AC002310.3-201ENST00000569728 723 ntBASIC6.37□□□□□ -1.39
CDH4P55283 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CDH4P55283 FAM27E2-201ENST00000619668 403 ntBASIC6.37□□□□□ -1.39
CDH4P55283 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH4P55283 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.37□□□□□ -1.39
CDH4P55283 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDH4P55283 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms