Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RANP6-201ENST00000413691 644 ntBASIC6.86□□□□□ -1.31
VCPP55072 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.86□□□□□ -1.31
VCPP55072 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 GTF3AP6-201ENST00000432585 986 ntBASIC6.86□□□□□ -1.31
VCPP55072 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.86□□□□□ -1.31
VCPP55072 UBBP5-201ENST00000446970 266 ntBASIC6.86□□□□□ -1.31
VCPP55072 RPL31P15-201ENST00000449770 338 ntBASIC6.86□□□□□ -1.31
VCPP55072 RPS26P39-201ENST00000469206 341 ntBASIC6.86□□□□□ -1.31
VCPP55072 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.86□□□□□ -1.31
VCPP55072 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.86□□□□□ -1.31
VCPP55072 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 AC027544.3-201ENST00000535082 757 ntBASIC6.86□□□□□ -1.31
VCPP55072 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.86□□□□□ -1.31
VCPP55072 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.86□□□□□ -1.31
VCPP55072 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 AC133552.4-201ENST00000576103 676 ntBASIC6.86□□□□□ -1.31
VCPP55072 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 MIR6719-201ENST00000622428 87 ntBASIC6.86□□□□□ -1.31
VCPP55072 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
VCPP55072 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.86□□□□□ -1.31
VCPP55072 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
VCPP55072 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
VCPP55072 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.85□□□□□ -1.31
VCPP55072 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VCPP55072 AC034229.2-201ENST00000566945 2508 ntBASIC6.85□□□□□ -1.31
VCPP55072 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VCPP55072 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
VCPP55072 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
VCPP55072 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VCPP55072 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
VCPP55072 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
VCPP55072 Z68868.1-201ENST00000429048 544 ntBASIC6.85□□□□□ -1.31
VCPP55072 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.85□□□□□ -1.31
VCPP55072 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.85□□□□□ -1.31
VCPP55072 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.85□□□□□ -1.31
VCPP55072 TVP23CP1-201ENST00000450317 639 ntBASIC6.85□□□□□ -1.31
VCPP55072 VPS25P1-201ENST00000455691 508 ntBASIC6.85□□□□□ -1.31
VCPP55072 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.85□□□□□ -1.31
VCPP55072 RPL7L1P4-201ENST00000513004 707 ntBASIC6.85□□□□□ -1.31
VCPP55072 AC092718.4-201ENST00000566639 716 ntBASIC6.85□□□□□ -1.31
VCPP55072 AL356986.1-201ENST00000604085 341 ntBASIC6.85□□□□□ -1.31
VCPP55072 AC025171.4-201ENST00000607250 1047 ntBASIC6.85□□□□□ -1.31
VCPP55072 AL136295.6-201ENST00000610486 658 ntBASIC6.85□□□□□ -1.31
VCPP55072 AC024884.1-201ENST00000620583 399 ntBASIC6.85□□□□□ -1.31
VCPP55072 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.85□□□□□ -1.31
VCPP55072 FO681491.1-202ENST00000623392 737 ntBASIC6.85□□□□□ -1.31
VCPP55072 AC018692.2-201ENST00000624130 348 ntBASIC6.85□□□□□ -1.31
VCPP55072 AC016542.2-201ENST00000624201 619 ntBASIC6.85□□□□□ -1.31
VCPP55072 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.85□□□□□ -1.31
VCPP55072 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.85□□□□□ -1.31
VCPP55072 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.85□□□□□ -1.31
VCPP55072 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
VCPP55072 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
VCPP55072 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.85□□□□□ -1.31
VCPP55072 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.85□□□□□ -1.31
VCPP55072 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
VCPP55072 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.85□□□□□ -1.31
VCPP55072 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VCPP55072 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
VCPP55072 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VCPP55072 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VCPP55072 AC010624.4-201ENST00000597606 1351 ntBASIC6.84□□□□□ -1.31
VCPP55072 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
VCPP55072 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.84□□□□□ -1.31
VCPP55072 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VCPP55072 AC006213.6-201ENST00000623722 4179 ntBASIC6.84□□□□□ -1.31
VCPP55072 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.84□□□□□ -1.31
VCPP55072 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VCPP55072 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
VCPP55072 RNU4-64P-201ENST00000410795 131 ntBASIC6.84□□□□□ -1.31
VCPP55072 KATNBL1P2-201ENST00000433311 835 ntBASIC6.84□□□□□ -1.31
VCPP55072 AL020997.1-201ENST00000446554 349 ntBASIC6.84□□□□□ -1.31
VCPP55072 MYO5BP2-201ENST00000449815 1277 ntBASIC6.84□□□□□ -1.31
VCPP55072 RPL23AP64-201ENST00000469465 435 ntBASIC6.84□□□□□ -1.31
VCPP55072 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.84□□□□□ -1.31
VCPP55072 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.31
VCPP55072 PSMA2P2-201ENST00000504319 686 ntBASIC6.84□□□□□ -1.31
VCPP55072 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.84□□□□□ -1.31
VCPP55072 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.84□□□□□ -1.31
VCPP55072 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.84□□□□□ -1.31
VCPP55072 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
VCPP55072 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.84□□□□□ -1.31
VCPP55072 SYPL1P2-201ENST00000582878 727 ntBASIC6.84□□□□□ -1.31
VCPP55072 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms