Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 AL845552.1-201ENST00000556820 323 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 AC090651.1-201ENST00000567865 634 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK2P53671 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 AL589863.1-201ENST00000595383 631 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 SMIM12P1-201ENST00000603004 274 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 AC073046.2-201ENST00000604756 527 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 PCA3_2.1-201ENST00000612507 409 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 AL109924.4-201ENST00000623089 670 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.32□□□□□ -1.4
LIMK2P53671 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.32□□□□□ -1.4
LIMK2P53671 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 AC010401.2-201ENST00000575137 4934 ntBASIC6.32□□□□□ -1.4
LIMK2P53671 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK2P53671 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
LIMK2P53671 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK2P53671 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK2P53671 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK2P53671 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK2P53671 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
LIMK2P53671 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
LIMK2P53671 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.31□□□□□ -1.4
LIMK2P53671 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.31□□□□□ -1.4
LIMK2P53671 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
LIMK2P53671 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.31□□□□□ -1.4
LIMK2P53671 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
LIMK2P53671 YWHAZP6-201ENST00000399764 738 ntBASIC6.31□□□□□ -1.4
LIMK2P53671 MIR1282-201ENST00000408865 101 ntBASIC6.31□□□□□ -1.4
LIMK2P53671 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.31□□□□□ -1.4
LIMK2P53671 RPL12P11-201ENST00000439970 501 ntBASIC6.31□□□□□ -1.4
LIMK2P53671 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.31□□□□□ -1.4
LIMK2P53671 COX4I1P2-201ENST00000447446 547 ntBASIC6.31□□□□□ -1.4
LIMK2P53671 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.31□□□□□ -1.4
LIMK2P53671 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.31□□□□□ -1.4
LIMK2P53671 RARRES2P3-201ENST00000457739 473 ntBASIC6.31□□□□□ -1.4
LIMK2P53671 SLC25A51P1-201ENST00000468432 871 ntBASIC6.31□□□□□ -1.4
LIMK2P53671 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.31□□□□□ -1.4
LIMK2P53671 RNA5SP400-201ENST00000517155 111 ntBASIC6.31□□□□□ -1.4
LIMK2P53671 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.31□□□□□ -1.4
LIMK2P53671 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.31□□□□□ -1.4
LIMK2P53671 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.31□□□□□ -1.4
LIMK2P53671 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.31□□□□□ -1.4
LIMK2P53671 AL135999.3-201ENST00000610501 812 ntBASIC6.31□□□□□ -1.4
LIMK2P53671 MIR1910-201ENST00000636955 80 ntBASIC6.31□□□□□ -1.4
LIMK2P53671 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.31□□□□□ -1.4
LIMK2P53671 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
LIMK2P53671 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LIMK2P53671 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
LIMK2P53671 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.31□□□□□ -1.4
LIMK2P53671 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.31□□□□□ -1.4
LIMK2P53671 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LIMK2P53671 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
LIMK2P53671 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
LIMK2P53671 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
LIMK2P53671 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
LIMK2P53671 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
LIMK2P53671 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
LIMK2P53671 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK2P53671 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK2P53671 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.3□□□□□ -1.4
LIMK2P53671 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK2P53671 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.3□□□□□ -1.4
LIMK2P53671 RNU1-59P-201ENST00000364829 162 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK2P53671 MIR433-201ENST00000384837 93 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 MIR188-201ENST00000385034 86 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
LIMK2P53671 AC003045.1-201ENST00000398779 713 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 RNA5SP431-201ENST00000410312 120 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
LIMK2P53671 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.3□□□□□ -1.4
LIMK2P53671 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.3□□□□□ -1.4
LIMK2P53671 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.3□□□□□ -1.4
LIMK2P53671 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.3□□□□□ -1.4
LIMK2P53671 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.3□□□□□ -1.4
LIMK2P53671 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK2P53671 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
LIMK2P53671 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.3□□□□□ -1.4
LIMK2P53671 VPS25P1-201ENST00000455691 508 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.3□□□□□ -1.4
LIMK2P53671 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.3□□□□□ -1.4
LIMK2P53671 CYCSP25-201ENST00000525280 316 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 OR4A6P-201ENST00000534364 970 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 AC006512.2-201ENST00000543250 486 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.3□□□□□ -1.4
LIMK2P53671 TPRX1P1-201ENST00000557620 319 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 AC023968.1-201ENST00000560719 475 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 AC105036.1-201ENST00000566222 271 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
LIMK2P53671 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.3□□□□□ -1.4
LIMK2P53671 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.3□□□□□ -1.4
LIMK2P53671 AC016252.1-201ENST00000609721 474 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 U1.25-201ENST00000614085 162 ntBASIC6.3□□□□□ -1.4
LIMK2P53671 MIR6071-201ENST00000616741 78 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms