Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.82□□□□□ -1.32
NEK3P51956 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.82□□□□□ -1.32
NEK3P51956 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NEK3P51956 AC004232.1-201ENST00000571388 208 ntBASIC6.82□□□□□ -1.32
NEK3P51956 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.82□□□□□ -1.32
NEK3P51956 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.82□□□□□ -1.32
NEK3P51956 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.82□□□□□ -1.32
NEK3P51956 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.82□□□□□ -1.32
NEK3P51956 AL953862.2-201ENST00000603089 820 ntBASIC6.82□□□□□ -1.32
NEK3P51956 AL671309.1-201ENST00000603750 544 ntBASIC6.82□□□□□ -1.32
NEK3P51956 AL159169.2-201ENST00000610061 1269 ntBASIC6.82□□□□□ -1.32
NEK3P51956 AL158062.1-201ENST00000619632 745 ntBASIC6.82□□□□□ -1.32
NEK3P51956 AP001885.1-201ENST00000621658 558 ntBASIC6.82□□□□□ -1.32
NEK3P51956 AP002371.2-201ENST00000624450 503 ntBASIC6.82□□□□□ -1.32
NEK3P51956 AP003400.6-201ENST00000624698 740 ntBASIC6.82□□□□□ -1.32
NEK3P51956 SNORA16A-202ENST00000628458 135 ntBASIC6.82□□□□□ -1.32
NEK3P51956 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.82□□□□□ -1.32
NEK3P51956 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NEK3P51956 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NEK3P51956 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NEK3P51956 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NEK3P51956 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NEK3P51956 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.82□□□□□ -1.32
NEK3P51956 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NEK3P51956 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NEK3P51956 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.82□□□□□ -1.32
NEK3P51956 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.81□□□□□ -1.32
NEK3P51956 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.81□□□□□ -1.32
NEK3P51956 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NEK3P51956 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.81□□□□□ -1.32
NEK3P51956 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.81□□□□□ -1.32
NEK3P51956 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 RNA5SP308-201ENST00000362532 115 ntBASIC6.81□□□□□ -1.32
NEK3P51956 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 AL672167.2-201ENST00000377164 879 ntBASIC6.81□□□□□ -1.32
NEK3P51956 AL121977.1-201ENST00000401636 979 ntBASIC6.81□□□□□ -1.32
NEK3P51956 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 VN1R53P-201ENST00000429536 957 ntBASIC6.81□□□□□ -1.32
NEK3P51956 ZNF965P-201ENST00000432501 817 ntBASIC6.81□□□□□ -1.32
NEK3P51956 RPS18P1-201ENST00000447840 458 ntBASIC6.81□□□□□ -1.32
NEK3P51956 AL139156.3-201ENST00000454802 394 ntBASIC6.81□□□□□ -1.32
NEK3P51956 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 AC099340.1-201ENST00000475247 599 ntBASIC6.81□□□□□ -1.32
NEK3P51956 AC092349.1-201ENST00000504903 310 ntBASIC6.81□□□□□ -1.32
NEK3P51956 AC091849.1-201ENST00000509920 121 ntBASIC6.81□□□□□ -1.32
NEK3P51956 AC093770.1-201ENST00000511559 571 ntBASIC6.81□□□□□ -1.32
NEK3P51956 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.81□□□□□ -1.32
NEK3P51956 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.81□□□□□ -1.32
NEK3P51956 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.81□□□□□ -1.32
NEK3P51956 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.81□□□□□ -1.32
NEK3P51956 BTG1P1-201ENST00000540396 508 ntBASIC6.81□□□□□ -1.32
NEK3P51956 AC027176.2-201ENST00000559166 746 ntBASIC6.81□□□□□ -1.32
NEK3P51956 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 AP001496.3-201ENST00000580230 913 ntBASIC6.81□□□□□ -1.32
NEK3P51956 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.81□□□□□ -1.32
NEK3P51956 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.81□□□□□ -1.32
NEK3P51956 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.81□□□□□ -1.32
NEK3P51956 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.81□□□□□ -1.32
NEK3P51956 AC011497.2-201ENST00000600255 639 ntBASIC6.81□□□□□ -1.32
NEK3P51956 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.81□□□□□ -1.32
NEK3P51956 AC005021.1-201ENST00000608730 355 ntBASIC6.81□□□□□ -1.32
NEK3P51956 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
NEK3P51956 FANCD2P2-201ENST00000437591 1400 ntBASIC6.81□□□□□ -1.32
NEK3P51956 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
NEK3P51956 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEK3P51956 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.81□□□□□ -1.32
NEK3P51956 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.81□□□□□ -1.32
NEK3P51956 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEK3P51956 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEK3P51956 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.8□□□□□ -1.32
NEK3P51956 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEK3P51956 AC107021.2-201ENST00000567714 2095 ntBASIC6.8□□□□□ -1.32
NEK3P51956 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEK3P51956 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.8□□□□□ -1.32
NEK3P51956 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEK3P51956 MIR191-201ENST00000384873 92 ntBASIC6.8□□□□□ -1.32
NEK3P51956 AL590635.1-201ENST00000406314 586 ntBASIC6.8□□□□□ -1.32
NEK3P51956 RN7SKP146-201ENST00000410242 334 ntBASIC6.8□□□□□ -1.32
NEK3P51956 EIF2S2P3-201ENST00000428356 999 ntBASIC6.8□□□□□ -1.32
NEK3P51956 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NEK3P51956 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.8□□□□□ -1.32
NEK3P51956 RPS26P4-201ENST00000431743 355 ntBASIC6.8□□□□□ -1.32
NEK3P51956 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NEK3P51956 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.8□□□□□ -1.32
NEK3P51956 AC245517.2-201ENST00000442890 346 ntBASIC6.8□□□□□ -1.32
NEK3P51956 SUMO2P1-206ENST00000445436 284 ntBASIC6.8□□□□□ -1.32
NEK3P51956 AL627224.1-201ENST00000448334 444 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms