Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CX3CR1P49238 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.47□□□□□ -1.53
CX3CR1P49238 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.47□□□□□ -1.53
CX3CR1P49238 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CR1P49238 SNORD94-201ENST00000386037 137 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CX3CR1P49238 ARSFP1-201ENST00000398758 477 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 AC017078.1-201ENST00000416146 368 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CX3CR1P49238 GTF3AP6-201ENST00000432585 986 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 AC013410.1-201ENST00000436223 1232 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 PSMD8P1-201ENST00000436275 769 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 EMC3-AS1-205ENST00000438698 534 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.47□□□□□ -1.53
CX3CR1P49238 WDR82P2-201ENST00000444540 928 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CR1P49238 RN7SL643P-201ENST00000471845 291 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 AP003385.3-201ENST00000472498 287 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 RN7SL502P-201ENST00000481857 290 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 AC015524.1-201ENST00000491585 472 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.47□□□□□ -1.53
CX3CR1P49238 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.47□□□□□ -1.53
CX3CR1P49238 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.47□□□□□ -1.53
CX3CR1P49238 OR7E158P-201ENST00000524483 910 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 RPA2P3-201ENST00000533268 770 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.47□□□□□ -1.53
CX3CR1P49238 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.47□□□□□ -1.53
CX3CR1P49238 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.47□□□□□ -1.53
CX3CR1P49238 AC090651.1-201ENST00000567865 634 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.47□□□□□ -1.53
CX3CR1P49238 AC107993.1-201ENST00000591343 684 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.47□□□□□ -1.53
CX3CR1P49238 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 U91328.4-201ENST00000608919 517 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CR1P49238 OR7E91P-202ENST00000642062 1198 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CR1P49238 ZNF101P1-201ENST00000435701 1720 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CR1P49238 AL121839.2-201ENST00000565058 6943 ntBASIC5.47□□□□□ -1.53
CX3CR1P49238 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.47□□□□□ -1.53
CX3CR1P49238 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CX3CR1P49238 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CR1P49238 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CX3CR1P49238 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CX3CR1P49238 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
CX3CR1P49238 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CX3CR1P49238 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.46□□□□□ -1.53
CX3CR1P49238 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
CX3CR1P49238 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CR1P49238 HDAC1P2-201ENST00000453661 1398 ntBASIC5.46□□□□□ -1.54
CX3CR1P49238 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CR1P49238 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.46□□□□□ -1.54
CX3CR1P49238 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.46□□□□□ -1.54
CX3CR1P49238 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
CX3CR1P49238 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CR1P49238 RNA5SP85-201ENST00000365378 119 ntBASIC5.46□□□□□ -1.54
CX3CR1P49238 GNG5P2-201ENST00000372054 207 ntBASIC5.46□□□□□ -1.54
CX3CR1P49238 AC002127.1-201ENST00000421305 225 ntBASIC5.46□□□□□ -1.54
CX3CR1P49238 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.46□□□□□ -1.54
CX3CR1P49238 LDHAP2-201ENST00000437325 985 ntBASIC5.46□□□□□ -1.54
CX3CR1P49238 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CR1P49238 AC016908.1-201ENST00000442571 1219 ntBASIC5.46□□□□□ -1.54
CX3CR1P49238 COX4I1P2-201ENST00000447446 547 ntBASIC5.46□□□□□ -1.54
CX3CR1P49238 AC009963.4-201ENST00000448535 339 ntBASIC5.46□□□□□ -1.54
CX3CR1P49238 PPIAP32-201ENST00000449940 472 ntBASIC5.46□□□□□ -1.54
CX3CR1P49238 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.46□□□□□ -1.54
CX3CR1P49238 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.46□□□□□ -1.54
CX3CR1P49238 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.46□□□□□ -1.54
CX3CR1P49238 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.46□□□□□ -1.54
CX3CR1P49238 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.46□□□□□ -1.54
CX3CR1P49238 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CR1P49238 RPL41P2-201ENST00000544920 409 ntBASIC5.46□□□□□ -1.54
CX3CR1P49238 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.46□□□□□ -1.54
CX3CR1P49238 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.46□□□□□ -1.54
CX3CR1P49238 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CR1P49238 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CR1P49238 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.46□□□□□ -1.54
CX3CR1P49238 AP001267.4-201ENST00000602598 545 ntBASIC5.46□□□□□ -1.54
CX3CR1P49238 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.46□□□□□ -1.54
CX3CR1P49238 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.46□□□□□ -1.54
CX3CR1P49238 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.46□□□□□ -1.54
CX3CR1P49238 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CR1P49238 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CX3CR1P49238 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CR1P49238 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
CX3CR1P49238 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CR1P49238 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CX3CR1P49238 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CR1P49238 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CR1P49238 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CX3CR1P49238 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
CX3CR1P49238 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CR1P49238 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.45□□□□□ -1.54
CX3CR1P49238 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CR1P49238 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
CX3CR1P49238 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CX3CR1P49238 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms