Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.33□□□□□ -1.56
CDX1P47902 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDX1P47902 FAM32BP-201ENST00000344033 333 ntBASIC5.33□□□□□ -1.56
CDX1P47902 AC026310.1-201ENST00000396004 378 ntBASIC5.33□□□□□ -1.56
CDX1P47902 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDX1P47902 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC5.33□□□□□ -1.56
CDX1P47902 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.33□□□□□ -1.56
CDX1P47902 RPS17P17-201ENST00000419392 409 ntBASIC5.33□□□□□ -1.56
CDX1P47902 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.33□□□□□ -1.56
CDX1P47902 PTPN2P1-201ENST00000423212 1072 ntBASIC5.33□□□□□ -1.56
CDX1P47902 AC000089.1-201ENST00000424559 801 ntBASIC5.33□□□□□ -1.56
CDX1P47902 PRUNEP1-201ENST00000425846 705 ntBASIC5.33□□□□□ -1.56
CDX1P47902 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.33□□□□□ -1.56
CDX1P47902 RPS10P21-201ENST00000430654 475 ntBASIC5.33□□□□□ -1.56
CDX1P47902 PSMD8P1-201ENST00000436275 769 ntBASIC5.33□□□□□ -1.56
CDX1P47902 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.33□□□□□ -1.56
CDX1P47902 RPL31P20-201ENST00000449593 360 ntBASIC5.33□□□□□ -1.56
CDX1P47902 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.33□□□□□ -1.56
CDX1P47902 AC073476.1-201ENST00000452854 407 ntBASIC5.33□□□□□ -1.56
CDX1P47902 AC022080.2-201ENST00000452932 533 ntBASIC5.33□□□□□ -1.56
CDX1P47902 AC105918.1-201ENST00000474399 838 ntBASIC5.33□□□□□ -1.56
CDX1P47902 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.33□□□□□ -1.56
CDX1P47902 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.33□□□□□ -1.56
CDX1P47902 SNX18P23-201ENST00000510867 677 ntBASIC5.33□□□□□ -1.56
CDX1P47902 SNORA70.11-201ENST00000515987 138 ntBASIC5.33□□□□□ -1.56
CDX1P47902 SNORA70.13-201ENST00000516116 138 ntBASIC5.33□□□□□ -1.56
CDX1P47902 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.33□□□□□ -1.56
CDX1P47902 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.33□□□□□ -1.56
CDX1P47902 IGKV2D-38-201ENST00000518423 240 ntBASIC5.33□□□□□ -1.56
CDX1P47902 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.33□□□□□ -1.56
CDX1P47902 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 OR7E10P-201ENST00000526420 991 ntBASIC5.33□□□□□ -1.56
CDX1P47902 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.33□□□□□ -1.56
CDX1P47902 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.33□□□□□ -1.56
CDX1P47902 AC008126.1-201ENST00000549019 480 ntBASIC5.33□□□□□ -1.56
CDX1P47902 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 AL591767.3-201ENST00000554632 525 ntBASIC5.33□□□□□ -1.56
CDX1P47902 AC007494.1-201ENST00000562293 760 ntBASIC5.33□□□□□ -1.56
CDX1P47902 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC5.33□□□□□ -1.56
CDX1P47902 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDX1P47902 AC020914.7-201ENST00000594477 545 ntBASIC5.33□□□□□ -1.56
CDX1P47902 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.33□□□□□ -1.56
CDX1P47902 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 AL359704.2-201ENST00000604335 521 ntBASIC5.33□□□□□ -1.56
CDX1P47902 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 AC012467.1-201ENST00000607740 256 ntBASIC5.33□□□□□ -1.56
CDX1P47902 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDX1P47902 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDX1P47902 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDX1P47902 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDX1P47902 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.33□□□□□ -1.56
CDX1P47902 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.33□□□□□ -1.56
CDX1P47902 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDX1P47902 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDX1P47902 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.33□□□□□ -1.56
CDX1P47902 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 AL512329.1-201ENST00000404600 1592 ntBASIC5.33□□□□□ -1.56
CDX1P47902 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CDX1P47902 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.33□□□□□ -1.56
CDX1P47902 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDX1P47902 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDX1P47902 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.32□□□□□ -1.56
CDX1P47902 AC110373.1-201ENST00000505994 3505 ntBASIC5.32□□□□□ -1.56
CDX1P47902 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDX1P47902 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDX1P47902 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDX1P47902 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.32□□□□□ -1.56
CDX1P47902 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.32□□□□□ -1.56
CDX1P47902 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CDX1P47902 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.32□□□□□ -1.56
CDX1P47902 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CDX1P47902 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDX1P47902 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
CDX1P47902 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.32□□□□□ -1.56
CDX1P47902 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDX1P47902 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.32□□□□□ -1.56
CDX1P47902 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.32□□□□□ -1.56
CDX1P47902 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CDX1P47902 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDX1P47902 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.32□□□□□ -1.56
CDX1P47902 AC092634.1-201ENST00000366505 199 ntBASIC5.32□□□□□ -1.56
CDX1P47902 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.32□□□□□ -1.56
CDX1P47902 ARSFP1-201ENST00000398758 477 ntBASIC5.32□□□□□ -1.56
CDX1P47902 AL136116.2-201ENST00000404020 785 ntBASIC5.32□□□□□ -1.56
CDX1P47902 MIR1266-201ENST00000408125 84 ntBASIC5.32□□□□□ -1.56
CDX1P47902 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.32□□□□□ -1.56
CDX1P47902 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.32□□□□□ -1.56
CDX1P47902 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.32□□□□□ -1.56
CDX1P47902 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.32□□□□□ -1.56
CDX1P47902 GAPDHP57-201ENST00000424400 585 ntBASIC5.32□□□□□ -1.56
CDX1P47902 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDX1P47902 MTCO1P57-201ENST00000432182 261 ntBASIC5.32□□□□□ -1.56
CDX1P47902 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms