Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 MORF4L2P1-201ENST00000503761 858 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN9P43378 OR4D12P-201ENST00000509361 911 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN9P43378 CCNHP1-201ENST00000513311 678 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN9P43378 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN9P43378 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN9P43378 RPA2P3-201ENST00000533268 770 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.57□□□□□ -1.36
PTPN9P43378 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN9P43378 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN9P43378 AC012368.3-201ENST00000604190 219 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 NDUFB9P1-201ENST00000604683 510 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.57□□□□□ -1.36
PTPN9P43378 AL391597.1-201ENST00000618707 694 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 AC069542.2-201ENST00000624816 216 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.57□□□□□ -1.36
PTPN9P43378 AC011504.1-201ENST00000623331 4103 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
PTPN9P43378 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN9P43378 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.57□□□□□ -1.36
PTPN9P43378 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN9P43378 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
PTPN9P43378 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN9P43378 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
PTPN9P43378 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN9P43378 SSXP3-201ENST00000442971 1300 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN9P43378 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
PTPN9P43378 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN9P43378 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN9P43378 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN9P43378 AL589826.1-201ENST00000340697 249 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN9P43378 RNU4-23P-201ENST00000362839 140 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 SNORA70H-201ENST00000383910 135 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 SNORA70J-201ENST00000384182 135 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 MIR433-201ENST00000384837 93 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 YWHAZP4-201ENST00000392459 708 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 AL445238.1-204ENST00000400311 463 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 RN7SKP146-201ENST00000410242 334 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 RNA5SP198-201ENST00000410376 127 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 RN7SKP121-201ENST00000410842 305 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 AC116036.1-201ENST00000412199 367 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN9P43378 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN9P43378 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN9P43378 FAM183DP-201ENST00000421987 399 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN9P43378 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN9P43378 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN9P43378 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN9P43378 KF459542.1-201ENST00000450908 553 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 RANP2-201ENST00000456833 229 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN9P43378 OR52A4P-202ENST00000481634 799 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN9P43378 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.56□□□□□ -1.36
PTPN9P43378 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN9P43378 AP003168.1-201ENST00000530091 307 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN9P43378 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN9P43378 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN9P43378 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN9P43378 AC027229.1-201ENST00000583887 253 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN9P43378 WBP1LP11-201ENST00000586141 328 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.56□□□□□ -1.36
PTPN9P43378 DYNLL1P1-201ENST00000595442 269 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN9P43378 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN9P43378 AC138473.1-201ENST00000605717 526 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 AL021368.3-201ENST00000607119 578 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 AC010998.3-201ENST00000613871 631 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 AL122023.1-201ENST00000622847 530 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 AC063952.1-203ENST00000634410 658 ntBASIC6.56□□□□□ -1.36
PTPN9P43378 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PTPN9P43378 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN9P43378 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN9P43378 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN9P43378 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN9P43378 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN9P43378 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN9P43378 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN9P43378 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.55□□□□□ -1.36
PTPN9P43378 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.55□□□□□ -1.36
PTPN9P43378 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTPN9P43378 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTPN9P43378 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTPN9P43378 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTPN9P43378 AL353763.1-201ENST00000624467 1628 ntBASIC6.55□□□□□ -1.36
PTPN9P43378 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTPN9P43378 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTPN9P43378 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTPN9P43378 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
PTPN9P43378 RPL11P4-201ENST00000332269 436 ntBASIC6.55□□□□□ -1.36
PTPN9P43378 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTPN9P43378 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms