Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.45□□□□□ -1.38
SLC1A1P43005 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.45□□□□□ -1.38
SLC1A1P43005 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.45□□□□□ -1.38
SLC1A1P43005 AC008555.7-201ENST00000605008 583 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 AC141002.1-201ENST00000607025 279 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.45□□□□□ -1.38
SLC1A1P43005 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SLC1A1P43005 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.45□□□□□ -1.38
SLC1A1P43005 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 AC016583.1-201ENST00000624221 2431 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 AC011416.1-201ENST00000514947 1732 ntBASIC6.45□□□□□ -1.38
SLC1A1P43005 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SLC1A1P43005 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SLC1A1P43005 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SLC1A1P43005 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SLC1A1P43005 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SLC1A1P43005 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.44□□□□□ -1.38
SLC1A1P43005 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.44□□□□□ -1.38
SLC1A1P43005 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SLC1A1P43005 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SLC1A1P43005 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.44□□□□□ -1.38
SLC1A1P43005 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SLC1A1P43005 AL133243.2-201ENST00000610331 1621 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SLC1A1P43005 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SLC1A1P43005 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SLC1A1P43005 AL157702.1-201ENST00000398764 426 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.44□□□□□ -1.38
SLC1A1P43005 OSTCP4-201ENST00000424397 449 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SLC1A1P43005 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.44□□□□□ -1.38
SLC1A1P43005 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.44□□□□□ -1.38
SLC1A1P43005 GAPDHP19-201ENST00000431768 1005 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.44□□□□□ -1.38
SLC1A1P43005 KATNBL1P2-201ENST00000433311 835 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 AL162739.1-201ENST00000450606 307 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 HIGD1AP16-201ENST00000450986 258 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.44□□□□□ -1.38
SLC1A1P43005 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.44□□□□□ -1.38
SLC1A1P43005 AL133351.3-201ENST00000454998 193 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 AC022730.1-201ENST00000473114 568 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.44□□□□□ -1.38
SLC1A1P43005 RPL23AP40-201ENST00000487630 390 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 MTCO1P55-201ENST00000489829 745 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 AC018639.1-201ENST00000492994 442 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.44□□□□□ -1.38
SLC1A1P43005 AC090958.1-201ENST00000511122 351 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 RNA5SP206-201ENST00000516703 121 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 Y_RNA.710-201ENST00000516975 110 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 NATP-201ENST00000523491 878 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6.44□□□□□ -1.38
SLC1A1P43005 RNU4ATAC-201ENST00000580972 127 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 AC024267.2-201ENST00000582737 417 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
SLC1A1P43005 AL589765.6-201ENST00000601909 549 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.44□□□□□ -1.38
SLC1A1P43005 RN7SL261P-201ENST00000613441 282 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 AC211486.4-201ENST00000621495 113 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.44□□□□□ -1.38
SLC1A1P43005 AC022164.1-201ENST00000568767 2673 ntBASIC6.44□□□□□ -1.38
SLC1A1P43005 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SLC1A1P43005 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SLC1A1P43005 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.44□□□□□ -1.38
SLC1A1P43005 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SLC1A1P43005 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A1P43005 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A1P43005 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.43□□□□□ -1.38
SLC1A1P43005 AC092724.1-201ENST00000624623 3397 ntBASIC6.43□□□□□ -1.38
SLC1A1P43005 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
SLC1A1P43005 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A1P43005 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SLC1A1P43005 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
SLC1A1P43005 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A1P43005 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.43□□□□□ -1.38
SLC1A1P43005 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.43□□□□□ -1.38
SLC1A1P43005 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SLC1A1P43005 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A1P43005 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.43□□□□□ -1.38
SLC1A1P43005 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SLC1A1P43005 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A1P43005 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A1P43005 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.43□□□□□ -1.38
SLC1A1P43005 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A1P43005 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SLC1A1P43005 AC094019.1-201ENST00000434678 472 ntBASIC6.43□□□□□ -1.38
SLC1A1P43005 PSMD8P1-201ENST00000436275 769 ntBASIC6.43□□□□□ -1.38
SLC1A1P43005 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.43□□□□□ -1.38
SLC1A1P43005 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.43□□□□□ -1.38
SLC1A1P43005 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.43□□□□□ -1.38
SLC1A1P43005 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.43□□□□□ -1.38
SLC1A1P43005 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.43□□□□□ -1.38
SLC1A1P43005 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms