Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 AC245100.2-201ENST00000454544 1679 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
HNF4AP41235 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.22□□□□□ -1.41
HNF4AP41235 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
HNF4AP41235 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.21□□□□□ -1.41
HNF4AP41235 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
HNF4AP41235 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.21□□□□□ -1.41
HNF4AP41235 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
HNF4AP41235 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.21□□□□□ -1.41
HNF4AP41235 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
HNF4AP41235 MTCO1P28-201ENST00000574177 1528 ntBASIC6.21□□□□□ -1.42
HNF4AP41235 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HNF4AP41235 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.21□□□□□ -1.42
HNF4AP41235 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HNF4AP41235 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HNF4AP41235 RNA5SP514-201ENST00000363717 111 ntBASIC6.21□□□□□ -1.42
HNF4AP41235 SNORD94-201ENST00000386037 137 ntBASIC6.21□□□□□ -1.42
HNF4AP41235 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HNF4AP41235 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.21□□□□□ -1.42
HNF4AP41235 AL445213.1-201ENST00000412589 747 ntBASIC6.21□□□□□ -1.42
HNF4AP41235 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.21□□□□□ -1.42
HNF4AP41235 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.21□□□□□ -1.42
HNF4AP41235 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.21□□□□□ -1.42
HNF4AP41235 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
HNF4AP41235 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
HNF4AP41235 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.21□□□□□ -1.42
HNF4AP41235 GAPDHP37-201ENST00000442317 968 ntBASIC6.21□□□□□ -1.42
HNF4AP41235 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HNF4AP41235 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.21□□□□□ -1.42
HNF4AP41235 AC012123.2-201ENST00000485809 248 ntBASIC6.21□□□□□ -1.42
HNF4AP41235 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.21□□□□□ -1.42
HNF4AP41235 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.21□□□□□ -1.42
HNF4AP41235 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.21□□□□□ -1.42
HNF4AP41235 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HNF4AP41235 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.21□□□□□ -1.42
HNF4AP41235 RPL3P13-201ENST00000550415 216 ntBASIC6.21□□□□□ -1.42
HNF4AP41235 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.21□□□□□ -1.42
HNF4AP41235 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.21□□□□□ -1.42
HNF4AP41235 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.21□□□□□ -1.42
HNF4AP41235 SYPL1P2-201ENST00000582878 727 ntBASIC6.21□□□□□ -1.42
HNF4AP41235 AC090616.1-201ENST00000583895 447 ntBASIC6.21□□□□□ -1.42
HNF4AP41235 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.21□□□□□ -1.42
HNF4AP41235 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.21□□□□□ -1.42
HNF4AP41235 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.21□□□□□ -1.42
HNF4AP41235 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC6.21□□□□□ -1.42
HNF4AP41235 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.21□□□□□ -1.42
HNF4AP41235 AC068726.1-201ENST00000610993 341 ntBASIC6.21□□□□□ -1.42
HNF4AP41235 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HNF4AP41235 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.21□□□□□ -1.42
HNF4AP41235 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HNF4AP41235 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.21□□□□□ -1.42
HNF4AP41235 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HNF4AP41235 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.21□□□□□ -1.42
HNF4AP41235 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HNF4AP41235 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HNF4AP41235 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.21□□□□□ -1.42
HNF4AP41235 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.21□□□□□ -1.42
HNF4AP41235 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HNF4AP41235 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HNF4AP41235 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HNF4AP41235 AC068769.1-201ENST00000474767 2426 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HNF4AP41235 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HNF4AP41235 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HNF4AP41235 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.2□□□□□ -1.42
HNF4AP41235 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.2□□□□□ -1.42
HNF4AP41235 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HNF4AP41235 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HNF4AP41235 RPL31P11-201ENST00000426558 1558 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 AC011369.2-201ENST00000624423 1567 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 AC125238.2-201ENST00000430003 1440 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 AC005702.3-201ENST00000585345 1447 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HNF4AP41235 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HNF4AP41235 RNA5SP85-201ENST00000365378 119 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.2□□□□□ -1.42
HNF4AP41235 RN7SKP221-201ENST00000410420 301 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 U3.43-201ENST00000410734 213 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.2□□□□□ -1.42
HNF4AP41235 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.2□□□□□ -1.42
HNF4AP41235 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.2□□□□□ -1.42
HNF4AP41235 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.2□□□□□ -1.42
HNF4AP41235 MED28P4-201ENST00000433137 572 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.2□□□□□ -1.42
HNF4AP41235 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.2□□□□□ -1.42
HNF4AP41235 SNRPFP2-201ENST00000440710 251 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.2□□□□□ -1.42
HNF4AP41235 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.2□□□□□ -1.42
HNF4AP41235 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.2□□□□□ -1.42
HNF4AP41235 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.2□□□□□ -1.42
HNF4AP41235 BCAS2P1-201ENST00000528022 632 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.2□□□□□ -1.42
HNF4AP41235 OR4A6P-201ENST00000534364 970 ntBASIC6.2□□□□□ -1.42
HNF4AP41235 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.2□□□□□ -1.42
HNF4AP41235 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 155.3 ms