Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXA9P31269 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXA9P31269 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXA9P31269 CDY5P-201ENST00000411487 1580 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 CDY9P-201ENST00000451397 1580 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXA9P31269 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HOXA9P31269 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXA9P31269 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HOXA9P31269 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXA9P31269 AL096800.1-201ENST00000405326 893 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 SSR1P1-201ENST00000407630 814 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 U3.43-201ENST00000410734 213 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.53□□□□□ -1.36
HOXA9P31269 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXA9P31269 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXA9P31269 AC005077.1-201ENST00000449226 375 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 ACA64.1-201ENST00000459171 127 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 AC011476.1-201ENST00000466725 307 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 RN7SL174P-201ENST00000475578 289 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 Y_RNA.667-201ENST00000516212 107 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXA9P31269 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXA9P31269 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.53□□□□□ -1.36
HOXA9P31269 AC125612.1-201ENST00000547580 377 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 AC068305.2-201ENST00000550567 1205 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXA9P31269 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXA9P31269 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXA9P31269 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXA9P31269 AC016590.3-201ENST00000611171 753 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.53□□□□□ -1.36
HOXA9P31269 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXA9P31269 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXA9P31269 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
HOXA9P31269 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXA9P31269 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXA9P31269 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXA9P31269 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXA9P31269 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXA9P31269 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
HOXA9P31269 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXA9P31269 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.36
HOXA9P31269 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
HOXA9P31269 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA9P31269 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
HOXA9P31269 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA9P31269 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA9P31269 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA9P31269 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA9P31269 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
HOXA9P31269 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HOXA9P31269 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXA9P31269 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXA9P31269 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HOXA9P31269 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
HOXA9P31269 AL132875.1-201ENST00000403623 949 ntBASIC6.52□□□□□ -1.37
HOXA9P31269 AL451046.1-201ENST00000406097 534 ntBASIC6.52□□□□□ -1.37
HOXA9P31269 RPS7P8-201ENST00000418311 581 ntBASIC6.52□□□□□ -1.37
HOXA9P31269 RPL35AP31-201ENST00000418340 337 ntBASIC6.52□□□□□ -1.37
HOXA9P31269 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXA9P31269 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXA9P31269 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXA9P31269 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXA9P31269 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXA9P31269 AC092824.1-201ENST00000483524 576 ntBASIC6.52□□□□□ -1.37
HOXA9P31269 RNA5SP438-201ENST00000516561 112 ntBASIC6.52□□□□□ -1.37
HOXA9P31269 AC021269.1-201ENST00000526860 705 ntBASIC6.52□□□□□ -1.37
HOXA9P31269 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXA9P31269 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXA9P31269 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.52□□□□□ -1.37
HOXA9P31269 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA9P31269 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXA9P31269 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXA9P31269 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXA9P31269 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXA9P31269 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXA9P31269 BX323046.1-201ENST00000610145 535 ntBASIC6.52□□□□□ -1.37
HOXA9P31269 MIR6768-201ENST00000610734 72 ntBASIC6.52□□□□□ -1.37
HOXA9P31269 MIR6793-201ENST00000612376 63 ntBASIC6.52□□□□□ -1.37
HOXA9P31269 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXA9P31269 AC011416.1-201ENST00000514947 1732 ntBASIC6.52□□□□□ -1.37
HOXA9P31269 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA9P31269 AC025809.2-201ENST00000625085 1802 ntBASIC6.52□□□□□ -1.37
HOXA9P31269 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXA9P31269 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
HOXA9P31269 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms