Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HMGA1P17096 AC010401.2-201ENST00000575137 4934 ntBASIC6.36□□□□□ -1.39
HMGA1P17096 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.36□□□□□ -1.39
HMGA1P17096 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGA1P17096 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGA1P17096 AL391261.1-201ENST00000555712 1479 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGA1P17096 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGA1P17096 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGA1P17096 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.35□□□□□ -1.39
HMGA1P17096 OR52B3P-201ENST00000314715 928 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.35□□□□□ -1.39
HMGA1P17096 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.35□□□□□ -1.39
HMGA1P17096 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.35□□□□□ -1.39
HMGA1P17096 RN7SKP161-201ENST00000411110 305 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.35□□□□□ -1.39
HMGA1P17096 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.35□□□□□ -1.39
HMGA1P17096 BX323845.3-201ENST00000428215 527 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.35□□□□□ -1.39
HMGA1P17096 OR13K1P-201ENST00000444577 975 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGA1P17096 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.35□□□□□ -1.39
HMGA1P17096 UBFD1P1-201ENST00000473259 814 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 AC114728.1-201ENST00000488289 483 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGA1P17096 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC6.35□□□□□ -1.39
HMGA1P17096 MTATP6P1-201ENST00000514057 681 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.35□□□□□ -1.39
HMGA1P17096 AP005639.1-201ENST00000526939 192 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 AP000648.1-201ENST00000529682 397 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.35□□□□□ -1.39
HMGA1P17096 AC092121.1-201ENST00000569452 202 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 AL031601.1-201ENST00000605702 394 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.35□□□□□ -1.39
HMGA1P17096 AL136131.3-201ENST00000607600 188 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 AC003992.1-201ENST00000635364 557 ntBASIC6.35□□□□□ -1.39
HMGA1P17096 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGA1P17096 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
HMGA1P17096 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGA1P17096 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGA1P17096 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HMGA1P17096 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HMGA1P17096 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HMGA1P17096 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
HMGA1P17096 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.34□□□□□ -1.39
HMGA1P17096 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HMGA1P17096 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HMGA1P17096 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HMGA1P17096 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGA1P17096 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HMGA1P17096 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGA1P17096 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGA1P17096 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGA1P17096 RNA5SP284-201ENST00000384547 118 ntBASIC6.34□□□□□ -1.39
HMGA1P17096 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.34□□□□□ -1.39
HMGA1P17096 RPS14P4-201ENST00000415880 418 ntBASIC6.34□□□□□ -1.39
HMGA1P17096 AL035660.1-201ENST00000422041 222 ntBASIC6.34□□□□□ -1.39
HMGA1P17096 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.34□□□□□ -1.39
HMGA1P17096 OR2AF1P-201ENST00000454899 889 ntBASIC6.34□□□□□ -1.39
HMGA1P17096 PPIAP19-201ENST00000486414 492 ntBASIC6.34□□□□□ -1.39
HMGA1P17096 AC104109.1-201ENST00000498563 436 ntBASIC6.34□□□□□ -1.39
HMGA1P17096 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGA1P17096 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HMGA1P17096 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGA1P17096 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGA1P17096 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGA1P17096 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGA1P17096 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGA1P17096 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGA1P17096 AC012146.2-201ENST00000576545 416 ntBASIC6.34□□□□□ -1.39
HMGA1P17096 AC020916.2-201ENST00000591242 360 ntBASIC6.34□□□□□ -1.39
HMGA1P17096 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.34□□□□□ -1.39
HMGA1P17096 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.34□□□□□ -1.39
HMGA1P17096 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGA1P17096 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HMGA1P17096 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
HMGA1P17096 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
HMGA1P17096 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.34□□□□□ -1.4
HMGA1P17096 AC012254.3-201ENST00000591183 2117 ntBASIC6.34□□□□□ -1.4
HMGA1P17096 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 AC008937.3-201ENST00000606813 1700 ntBASIC6.33□□□□□ -1.4
HMGA1P17096 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGA1P17096 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HMGA1P17096 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.33□□□□□ -1.4
HMGA1P17096 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.33□□□□□ -1.4
HMGA1P17096 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.33□□□□□ -1.4
HMGA1P17096 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.33□□□□□ -1.4
HMGA1P17096 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.33□□□□□ -1.4
HMGA1P17096 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
HMGA1P17096 RN7SKP292-201ENST00000365522 317 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms