Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC007346.1-201ENST00000569208 867 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.6□□□□□ -1.51
FREM3P0C091 AL683813.2-201ENST00000605245 502 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 MIR6768-201ENST00000610734 72 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 AC096861.1-201ENST00000616652 240 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 MIR6778-201ENST00000617912 73 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 AC022726.2-201ENST00000634673 547 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
FREM3P0C091 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.6□□□□□ -1.51
FREM3P0C091 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
FREM3P0C091 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.6□□□□□ -1.51
FREM3P0C091 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FREM3P0C091 AC005725.1-201ENST00000577346 2607 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
FREM3P0C091 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
FREM3P0C091 CCNT2P1-201ENST00000423082 1315 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.6□□□□□ -1.51
FREM3P0C091 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
FREM3P0C091 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
FREM3P0C091 AC096921.2-201ENST00000561507 1916 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
FREM3P0C091 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
FREM3P0C091 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FREM3P0C091 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.6□□□□□ -1.51
FREM3P0C091 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.6□□□□□ -1.51
FREM3P0C091 SUGT1P2-201ENST00000379452 992 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
FREM3P0C091 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.6□□□□□ -1.51
FREM3P0C091 RPL35AP3-201ENST00000414680 288 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.6□□□□□ -1.51
FREM3P0C091 NMD3P2-201ENST00000421815 761 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 AL358876.1-201ENST00000453364 1075 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 AL022319.1-201ENST00000458183 1167 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 RN7SL221P-201ENST00000466190 281 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 RPL12P31-201ENST00000478433 450 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 AP002884.1-201ENST00000479691 655 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.6□□□□□ -1.51
FREM3P0C091 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.6□□□□□ -1.51
FREM3P0C091 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.6□□□□□ -1.51
FREM3P0C091 AC027243.2-201ENST00000602530 724 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 AL096712.1-201ENST00000614561 159 ntBASIC5.6□□□□□ -1.51
FREM3P0C091 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.6□□□□□ -1.51
FREM3P0C091 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
FREM3P0C091 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.6□□□□□ -1.51
FREM3P0C091 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
FREM3P0C091 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.59□□□□□ -1.51
FREM3P0C091 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
FREM3P0C091 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FREM3P0C091 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FREM3P0C091 RNA5SP350-201ENST00000363298 111 ntBASIC5.59□□□□□ -1.51
FREM3P0C091 RNA5SP478-201ENST00000364657 115 ntBASIC5.59□□□□□ -1.51
FREM3P0C091 RPL35AP31-201ENST00000418340 337 ntBASIC5.59□□□□□ -1.51
FREM3P0C091 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FREM3P0C091 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.51
FREM3P0C091 AL157884.1-201ENST00000424561 454 ntBASIC5.59□□□□□ -1.51
FREM3P0C091 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.59□□□□□ -1.51
FREM3P0C091 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.59□□□□□ -1.51
FREM3P0C091 AC005017.1-201ENST00000482002 490 ntBASIC5.59□□□□□ -1.51
FREM3P0C091 RPL34P33-201ENST00000486062 334 ntBASIC5.59□□□□□ -1.51
FREM3P0C091 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FREM3P0C091 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.59□□□□□ -1.51
FREM3P0C091 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.59□□□□□ -1.51
FREM3P0C091 AC011853.1-201ENST00000518911 454 ntBASIC5.59□□□□□ -1.51
FREM3P0C091 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.59□□□□□ -1.51
FREM3P0C091 AL121579.2-201ENST00000555466 590 ntBASIC5.59□□□□□ -1.51
FREM3P0C091 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.59□□□□□ -1.51
FREM3P0C091 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.59□□□□□ -1.51
FREM3P0C091 uc_338.26-201ENST00000612659 160 ntBASIC5.59□□□□□ -1.51
FREM3P0C091 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.59□□□□□ -1.51
FREM3P0C091 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.59□□□□□ -1.51
FREM3P0C091 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FREM3P0C091 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
FREM3P0C091 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FREM3P0C091 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FREM3P0C091 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.59□□□□□ -1.51
FREM3P0C091 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
FREM3P0C091 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FREM3P0C091 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.59□□□□□ -1.51
FREM3P0C091 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
FREM3P0C091 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FREM3P0C091 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
FREM3P0C091 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
FREM3P0C091 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
FREM3P0C091 AL451142.1-201ENST00000375867 775 ntBASIC5.59□□□□□ -1.52
FREM3P0C091 AL360271.1-201ENST00000395679 510 ntBASIC5.59□□□□□ -1.52
FREM3P0C091 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.59□□□□□ -1.52
FREM3P0C091 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.59□□□□□ -1.52
FREM3P0C091 RPL21P50-201ENST00000417698 477 ntBASIC5.59□□□□□ -1.52
FREM3P0C091 AC079807.1-201ENST00000429993 481 ntBASIC5.59□□□□□ -1.52
FREM3P0C091 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.59□□□□□ -1.52
FREM3P0C091 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.59□□□□□ -1.52
FREM3P0C091 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
FREM3P0C091 AC006924.1-201ENST00000610750 559 ntBASIC5.59□□□□□ -1.52
FREM3P0C091 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.59□□□□□ -1.52
FREM3P0C091 AC129915.3-201ENST00000634128 948 ntBASIC5.59□□□□□ -1.52
FREM3P0C091 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.59□□□□□ -1.52
FREM3P0C091 OR7A1P-202ENST00000641542 1158 ntBASIC5.59□□□□□ -1.52
FREM3P0C091 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
FREM3P0C091 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms