Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AF287957.1-201ENST00000607368 1595 ntBASIC7.06□□□□□ -1.28
HOXC6P09630 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HOXC6P09630 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HOXC6P09630 AC022325.1-201ENST00000502748 2199 ntBASIC7.06□□□□□ -1.28
HOXC6P09630 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
HOXC6P09630 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
HOXC6P09630 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.06□□□□□ -1.28
HOXC6P09630 FO082842.1-201ENST00000423552 1370 ntBASIC7.06□□□□□ -1.28
HOXC6P09630 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.06□□□□□ -1.28
HOXC6P09630 AC025809.2-201ENST00000625085 1802 ntBASIC7.06□□□□□ -1.28
HOXC6P09630 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HOXC6P09630 AC024651.2-201ENST00000562480 2098 ntBASIC7.05□□□□□ -1.28
HOXC6P09630 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.05□□□□□ -1.28
HOXC6P09630 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC7.05□□□□□ -1.28
HOXC6P09630 AL359976.1-201ENST00000418655 3528 ntBASIC7.05□□□□□ -1.28
HOXC6P09630 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HOXC6P09630 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.05□□□□□ -1.28
HOXC6P09630 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HOXC6P09630 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
HOXC6P09630 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
HOXC6P09630 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.05□□□□□ -1.28
HOXC6P09630 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HOXC6P09630 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HOXC6P09630 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HOXC6P09630 MIR143-201ENST00000385300 106 ntBASIC7.05□□□□□ -1.28
HOXC6P09630 U3.43-201ENST00000410734 213 ntBASIC7.05□□□□□ -1.28
HOXC6P09630 SDHDP6-201ENST00000414693 480 ntBASIC7.05□□□□□ -1.28
HOXC6P09630 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.05□□□□□ -1.28
HOXC6P09630 MARK2P12-201ENST00000420129 585 ntBASIC7.05□□□□□ -1.28
HOXC6P09630 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.05□□□□□ -1.28
HOXC6P09630 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.05□□□□□ -1.28
HOXC6P09630 AL355355.1-201ENST00000442900 793 ntBASIC7.05□□□□□ -1.28
HOXC6P09630 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.05□□□□□ -1.28
HOXC6P09630 SUMO2P10-201ENST00000452006 288 ntBASIC7.05□□□□□ -1.28
HOXC6P09630 SNORA58-201ENST00000505219 137 ntBASIC7.05□□□□□ -1.28
HOXC6P09630 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.05□□□□□ -1.28
HOXC6P09630 RPL7L1P4-201ENST00000513004 707 ntBASIC7.05□□□□□ -1.28
HOXC6P09630 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.05□□□□□ -1.28
HOXC6P09630 COX6CP7-201ENST00000597056 208 ntBASIC7.05□□□□□ -1.28
HOXC6P09630 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.05□□□□□ -1.28
HOXC6P09630 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.05□□□□□ -1.28
HOXC6P09630 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.05□□□□□ -1.28
HOXC6P09630 AC022106.1-201ENST00000612834 766 ntBASIC7.05□□□□□ -1.28
HOXC6P09630 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.05□□□□□ -1.28
HOXC6P09630 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.05□□□□□ -1.28
HOXC6P09630 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.05□□□□□ -1.28
HOXC6P09630 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
HOXC6P09630 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HOXC6P09630 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
HOXC6P09630 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
HOXC6P09630 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.05□□□□□ -1.28
HOXC6P09630 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HOXC6P09630 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HOXC6P09630 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.04□□□□□ -1.28
HOXC6P09630 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HOXC6P09630 RN7SKP286-201ENST00000410894 299 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.04□□□□□ -1.28
HOXC6P09630 GAPDHP48-201ENST00000436626 961 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 PCBP2P1-201ENST00000437262 977 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 AL512637.1-201ENST00000439523 1231 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 AC011742.2-201ENST00000443818 352 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 AP000281.1-201ENST00000444036 316 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HOXC6P09630 AC114982.2-201ENST00000461396 358 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 RPS26P39-201ENST00000469206 341 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 RN7SL284P-201ENST00000498823 275 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
HOXC6P09630 AC253576.1-201ENST00000511645 1156 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 Y_RNA.710-201ENST00000516975 110 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
HOXC6P09630 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.04□□□□□ -1.28
HOXC6P09630 ZNF322P1-201ENST00000568013 1209 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 SNORD95-201ENST00000579879 68 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 AC006213.4-201ENST00000616184 634 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 AP005431.1-201ENST00000618479 319 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 AL049767.1-202ENST00000637826 242 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HOXC6P09630 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.04□□□□□ -1.28
HOXC6P09630 UGT2B27P-201ENST00000505092 1620 ntBASIC7.04□□□□□ -1.28
HOXC6P09630 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
HOXC6P09630 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HOXC6P09630 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
HOXC6P09630 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
HOXC6P09630 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HOXC6P09630 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.03□□□□□ -1.28
HOXC6P09630 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC7.03□□□□□ -1.28
HOXC6P09630 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HOXC6P09630 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HOXC6P09630 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.03□□□□□ -1.28
HOXC6P09630 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HOXC6P09630 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HOXC6P09630 RPS3AP2-201ENST00000407190 754 ntBASIC7.03□□□□□ -1.28
HOXC6P09630 AC245884.2-201ENST00000426257 404 ntBASIC7.03□□□□□ -1.28
HOXC6P09630 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC064862.4-201ENST00000442180 334 ntBASIC7.03□□□□□ -1.28
HOXC6P09630 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.03□□□□□ -1.28
HOXC6P09630 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.03□□□□□ -1.28
HOXC6P09630 AC026254.2-201ENST00000475295 371 ntBASIC7.03□□□□□ -1.28
HOXC6P09630 AL136038.1-201ENST00000497246 351 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms