Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC4P09017 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC4P09017 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC4P09017 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC4P09017 CASC19-238ENST00000641523 1558 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC4P09017 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC4P09017 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC4P09017 AC022905.1-201ENST00000503430 3048 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 AL391261.1-201ENST00000555712 1479 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HOXC4P09017 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC4P09017 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC4P09017 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC4P09017 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC4P09017 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC4P09017 TNPO1P2-201ENST00000426249 2665 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 AL117378.2-201ENST00000622916 1337 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HOXC4P09017 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC4P09017 LCN1P2-201ENST00000372030 223 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 AC245096.1-201ENST00000413104 546 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 AC115283.1-201ENST00000427353 400 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HOXC4P09017 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC4P09017 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC4P09017 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC4P09017 NDUFA5P5-201ENST00000468361 342 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 AC092865.4-201ENST00000477936 615 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 AC068522.1-201ENST00000482895 345 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.1□□□□□ -1.43
HOXC4P09017 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC4P09017 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC4P09017 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC4P09017 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC4P09017 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC4P09017 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC4P09017 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC4P09017 AC007956.1-201ENST00000555623 542 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC4P09017 AC090826.1-203ENST00000569235 490 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC4P09017 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC4P09017 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HOXC4P09017 AL138895.2-201ENST00000603019 178 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 AC008555.7-201ENST00000605008 583 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 AC004801.6-201ENST00000616571 978 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 AC245014.3-201ENST00000618589 347 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 AC073488.3-201ENST00000631611 778 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.1□□□□□ -1.43
HOXC4P09017 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC4P09017 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HOXC4P09017 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXC4P09017 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC4P09017 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXC4P09017 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
HOXC4P09017 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC4P09017 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC4P09017 AC062029.1-202ENST00000606164 3651 ntBASIC6.1□□□□□ -1.43
HOXC4P09017 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXC4P09017 BIN2P1-201ENST00000504996 1530 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 MTCO1P28-201ENST00000574177 1528 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC4P09017 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC4P09017 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXC4P09017 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC4P09017 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
HOXC4P09017 AC022325.1-201ENST00000502748 2199 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC4P09017 AL359091.1-201ENST00000449048 1734 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC4P09017 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC4P09017 RNA5SP514-201ENST00000363717 111 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 MIR130B-202ENST00000385018 82 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXC4P09017 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC4P09017 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC4P09017 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC4P09017 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC4P09017 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HOXC4P09017 AL451136.1-201ENST00000435399 325 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 AC002075.1-201ENST00000457396 676 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 AC128716.1-201ENST00000475129 166 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 PPP1R11P1-201ENST00000486095 376 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 SNORA81.2-201ENST00000516868 170 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 RNA5SP400-201ENST00000517155 111 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.09□□□□□ -1.43
HOXC4P09017 TRIM77BP-201ENST00000524985 1119 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC4P09017 AC021269.1-201ENST00000526860 705 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 AC027369.2-201ENST00000528030 440 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.09□□□□□ -1.43
HOXC4P09017 RPA2P1-201ENST00000556557 721 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.09□□□□□ -1.43
HOXC4P09017 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.09□□□□□ -1.43
HOXC4P09017 MIR3189-201ENST00000578735 73 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 AC090236.2-201ENST00000587933 1101 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 AC091193.1-201ENST00000604640 448 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 AC022106.1-201ENST00000612834 766 ntBASIC6.09□□□□□ -1.43
HOXC4P09017 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms