Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
COL1A1P02452 SHQ1P1-201ENST00000437111 1544 ntBASIC7.38□□□□□ -1.23
COL1A1P02452 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL1A1P02452 AC006213.6-201ENST00000623722 4179 ntBASIC7.38□□□□□ -1.23
COL1A1P02452 SPATA31C1-201ENST00000420021 3895 ntBASIC7.38□□□□□ -1.23
COL1A1P02452 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL1A1P02452 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.38□□□□□ -1.23
COL1A1P02452 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
COL1A1P02452 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL1A1P02452 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
COL1A1P02452 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL1A1P02452 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL1A1P02452 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.37□□□□□ -1.23
COL1A1P02452 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.37□□□□□ -1.23
COL1A1P02452 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.37□□□□□ -1.23
COL1A1P02452 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
COL1A1P02452 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL1A1P02452 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
COL1A1P02452 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL1A1P02452 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.37□□□□□ -1.23
COL1A1P02452 RN7SKP161-201ENST00000411110 305 ntBASIC7.37□□□□□ -1.23
COL1A1P02452 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.37□□□□□ -1.23
COL1A1P02452 RPS15AP30-201ENST00000420976 390 ntBASIC7.37□□□□□ -1.23
COL1A1P02452 KIF4CP-201ENST00000422742 1279 ntBASIC7.37□□□□□ -1.23
COL1A1P02452 AL121776.1-201ENST00000429337 372 ntBASIC7.37□□□□□ -1.23
COL1A1P02452 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.37□□□□□ -1.23
COL1A1P02452 RPSAP37-201ENST00000470913 821 ntBASIC7.37□□□□□ -1.23
COL1A1P02452 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL1A1P02452 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.37□□□□□ -1.23
COL1A1P02452 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.37□□□□□ -1.23
COL1A1P02452 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
COL1A1P02452 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.37□□□□□ -1.23
COL1A1P02452 AC013244.1-201ENST00000604279 193 ntBASIC7.37□□□□□ -1.23
COL1A1P02452 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.37□□□□□ -1.23
COL1A1P02452 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
COL1A1P02452 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
COL1A1P02452 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
COL1A1P02452 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.37□□□□□ -1.23
COL1A1P02452 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.37□□□□□ -1.23
COL1A1P02452 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
COL1A1P02452 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
COL1A1P02452 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL1A1P02452 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
COL1A1P02452 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL1A1P02452 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL1A1P02452 PABPC1P8-201ENST00000452851 2086 ntBASIC7.37□□□□□ -1.23
COL1A1P02452 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL1A1P02452 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
COL1A1P02452 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL1A1P02452 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
COL1A1P02452 AL391361.1-201ENST00000405580 489 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 AC245884.2-201ENST00000426257 404 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL1A1P02452 VN1R110P-201ENST00000438988 971 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 AL512637.1-201ENST00000439523 1231 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.36□□□□□ -1.23
COL1A1P02452 AC103563.5-201ENST00000455643 364 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
COL1A1P02452 RN7SL165P-201ENST00000477476 291 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL1A1P02452 SNORA26.10-201ENST00000516427 141 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.36□□□□□ -1.23
COL1A1P02452 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.36□□□□□ -1.23
COL1A1P02452 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.36□□□□□ -1.23
COL1A1P02452 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.36□□□□□ -1.23
COL1A1P02452 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.36□□□□□ -1.23
COL1A1P02452 AC239803.2-201ENST00000610161 430 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 AC096861.1-201ENST00000616652 240 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC7.36□□□□□ -1.23
COL1A1P02452 AC003992.1-201ENST00000635364 557 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
COL1A1P02452 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
COL1A1P02452 FTO-215ENST00000636491 1676 ntTSL 5 BASIC7.36□□□□□ -1.23
COL1A1P02452 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.36□□□□□ -1.23
COL1A1P02452 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL1A1P02452 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.36□□□□□ -1.23
COL1A1P02452 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.36□□□□□ -1.23
COL1A1P02452 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL1A1P02452 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL1A1P02452 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC7.36□□□□□ -1.23
COL1A1P02452 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL1A1P02452 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
COL1A1P02452 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL1A1P02452 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL1A1P02452 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL1A1P02452 AC096921.2-201ENST00000561507 1916 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
COL1A1P02452 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL1A1P02452 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL1A1P02452 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL1A1P02452 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL1A1P02452 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
COL1A1P02452 FAM32BP-201ENST00000344033 333 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.36□□□□□ -1.23
COL1A1P02452 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.36□□□□□ -1.23
COL1A1P02452 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 AC064862.4-201ENST00000442180 334 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.36□□□□□ -1.23
COL1A1P02452 ATP5LP3-201ENST00000514223 304 ntBASIC7.36□□□□□ -1.23
COL1A1P02452 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms