Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC2.59□□□□□ -1.99
USH2AO75445 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 AKAP12-203ENST00000359755 6190 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC2.59□□□□□ -1.99
USH2AO75445 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
USH2AO75445 AC107980.1-201ENST00000558671 3355 ntBASIC2.59□□□□□ -1.99
USH2AO75445 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
USH2AO75445 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
USH2AO75445 AC096537.2-201ENST00000413707 714 ntBASIC2.59□□□□□ -1.99
USH2AO75445 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC2.59□□□□□ -1.99
USH2AO75445 OR52B5P-201ENST00000435337 951 ntBASIC2.59□□□□□ -1.99
USH2AO75445 RPL36AP15-201ENST00000444514 266 ntBASIC2.59□□□□□ -1.99
USH2AO75445 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC2.59□□□□□ -1.99
USH2AO75445 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.59□□□□□ -1.99
USH2AO75445 BNIP3P5-201ENST00000562290 498 ntBASIC2.59□□□□□ -1.99
USH2AO75445 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC2.59□□□□□ -1.99
USH2AO75445 AC109583.2-201ENST00000617367 129 ntBASIC2.59□□□□□ -1.99
USH2AO75445 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC2.59□□□□□ -1.99
USH2AO75445 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC2.59□□□□□ -1.99
USH2AO75445 OR52B5P-202ENST00000641118 1110 ntBASIC2.59□□□□□ -1.99
USH2AO75445 AC022905.1-201ENST00000503430 3048 ntBASIC2.59□□□□□ -1.99
USH2AO75445 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC2.59□□□□□ -1.99
USH2AO75445 AC009166.2-201ENST00000624410 2833 ntBASIC2.59□□□□□ -1.99
USH2AO75445 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC2.59□□□□□ -1.99
USH2AO75445 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 ARHGAP42P2-201ENST00000416089 2140 ntBASIC2.59□□□□□ -1.99
USH2AO75445 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC2.59□□□□□ -1.99
USH2AO75445 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
USH2AO75445 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC2.59□□□□□ -1.99
USH2AO75445 RBPJP2-201ENST00000618187 1444 ntBASIC2.59□□□□□ -1.99
USH2AO75445 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
USH2AO75445 SNORA71.3-201ENST00000362582 128 ntBASIC2.59□□□□□ -1.99
USH2AO75445 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC2.59□□□□□ -1.99
USH2AO75445 RPL23AP83-201ENST00000434984 473 ntBASIC2.59□□□□□ -1.99
USH2AO75445 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC2.59□□□□□ -1.99
USH2AO75445 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 AL139156.3-201ENST00000454802 394 ntBASIC2.59□□□□□ -1.99
USH2AO75445 RPL7P16-201ENST00000479738 738 ntBASIC2.59□□□□□ -1.99
USH2AO75445 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 RN7SL205P-201ENST00000490174 284 ntBASIC2.59□□□□□ -1.99
USH2AO75445 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC2.59□□□□□ -1.99
USH2AO75445 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC2.59□□□□□ -1.99
USH2AO75445 OR7H2P-201ENST00000513483 306 ntBASIC2.59□□□□□ -1.99
USH2AO75445 RN7SL52P-201ENST00000584271 284 ntBASIC2.59□□□□□ -1.99
USH2AO75445 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC2.59□□□□□ -1.99
USH2AO75445 AC137695.1-201ENST00000604126 489 ntBASIC2.59□□□□□ -1.99
USH2AO75445 AC091193.1-201ENST00000604640 448 ntBASIC2.59□□□□□ -1.99
USH2AO75445 RN7SL722P-201ENST00000617780 284 ntBASIC2.59□□□□□ -1.99
USH2AO75445 RN7SL565P-201ENST00000618246 284 ntBASIC2.59□□□□□ -1.99
USH2AO75445 AC015660.5-201ENST00000623238 564 ntBASIC2.59□□□□□ -1.99
USH2AO75445 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC2.59□□□□□ -1.99
USH2AO75445 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC2.59□□□□□ -1.99
USH2AO75445 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC2.59□□□□□ -1.99
USH2AO75445 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC2.59□□□□□ -1.99
USH2AO75445 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
USH2AO75445 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC2.59□□□□□ -1.99
USH2AO75445 NIN-201ENST00000245441 10293 ntAPPRIS P5 TSL 5 BASIC2.59□□□□□ -1.99
USH2AO75445 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 HERC3-202ENST00000402738 4974 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 OR2M1P-201ENST00000318104 951 ntBASIC2.59□□□□□ -1.99
USH2AO75445 PRUNEP1-201ENST00000425846 705 ntBASIC2.59□□□□□ -1.99
USH2AO75445 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC2.59□□□□□ -1.99
USH2AO75445 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC2.59□□□□□ -1.99
USH2AO75445 RN7SL870P-201ENST00000460111 296 ntBASIC2.59□□□□□ -1.99
USH2AO75445 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC2.59□□□□□ -1.99
USH2AO75445 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC2.59□□□□□ -1.99
USH2AO75445 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
USH2AO75445 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.59□□□□□ -1.99
USH2AO75445 AC183089.2-201ENST00000637931 916 ntBASIC2.59□□□□□ -1.99
USH2AO75445 OR8B1P-202ENST00000641132 1178 ntBASIC2.59□□□□□ -1.99
USH2AO75445 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC2.59□□□□□ -1.99
USH2AO75445 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC2.59□□□□□ -1.99
USH2AO75445 ACTR3C-206ENST00000613959 5142 ntBASIC2.59□□□□□ -2
USH2AO75445 TNS1-221ENST00000615025 6488 ntTSL 5 BASIC2.59□□□□□ -2
USH2AO75445 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC2.59□□□□□ -2
USH2AO75445 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
USH2AO75445 FNDC3A-204ENST00000492622 6286 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms