Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC111152.1-202ENST00000635848 339 ntBASIC5.62□□□□□ -1.51
LMX1BO60663 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LMX1BO60663 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LMX1BO60663 BIN2P1-201ENST00000504996 1530 ntBASIC5.62□□□□□ -1.51
LMX1BO60663 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LMX1BO60663 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.62□□□□□ -1.51
LMX1BO60663 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LMX1BO60663 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LMX1BO60663 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.62□□□□□ -1.51
LMX1BO60663 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LMX1BO60663 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.62□□□□□ -1.51
LMX1BO60663 AC023632.6-201ENST00000624338 2177 ntBASIC5.62□□□□□ -1.51
LMX1BO60663 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.62□□□□□ -1.51
LMX1BO60663 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LMX1BO60663 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LMX1BO60663 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.62□□□□□ -1.51
LMX1BO60663 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
LMX1BO60663 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.61□□□□□ -1.51
LMX1BO60663 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LMX1BO60663 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LMX1BO60663 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.61□□□□□ -1.51
LMX1BO60663 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.61□□□□□ -1.51
LMX1BO60663 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 U3.43-201ENST00000410734 213 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 ELOCP6-201ENST00000429066 328 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 NFYAP1-201ENST00000431953 972 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.61□□□□□ -1.51
LMX1BO60663 PSMD10P2-201ENST00000432890 672 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 NDUFA5P8-201ENST00000449019 346 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.61□□□□□ -1.51
LMX1BO60663 ELOCP12-201ENST00000458706 328 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.61□□□□□ -1.51
LMX1BO60663 AC112484.3-201ENST00000505910 329 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 AC091965.3-201ENST00000506236 208 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.61□□□□□ -1.51
LMX1BO60663 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.61□□□□□ -1.51
LMX1BO60663 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LMX1BO60663 AC092451.2-201ENST00000538746 658 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 AC078878.1-201ENST00000539832 958 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.61□□□□□ -1.51
LMX1BO60663 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
LMX1BO60663 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.61□□□□□ -1.51
LMX1BO60663 MRPS21P9-201ENST00000571150 257 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.61□□□□□ -1.51
LMX1BO60663 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.61□□□□□ -1.51
LMX1BO60663 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.61□□□□□ -1.51
LMX1BO60663 AC063977.7-201ENST00000594454 337 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 BX322635.1-201ENST00000605804 496 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.61□□□□□ -1.51
LMX1BO60663 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 AC107905.1-201ENST00000616204 426 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 AL359742.1-201ENST00000622497 540 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 AL031123.3-201ENST00000623345 1837 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 AP001962.1-201ENST00000624114 559 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 AC011369.2-201ENST00000624423 1567 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.61□□□□□ -1.51
LMX1BO60663 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.61□□□□□ -1.51
LMX1BO60663 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.61□□□□□ -1.51
LMX1BO60663 AC119674.1-213ENST00000641177 1386 ntBASIC5.61□□□□□ -1.51
LMX1BO60663 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LMX1BO60663 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
LMX1BO60663 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.61□□□□□ -1.51
LMX1BO60663 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LMX1BO60663 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.6□□□□□ -1.51
LMX1BO60663 SMG1P5-202ENST00000529428 4219 ntBASIC5.6□□□□□ -1.51
LMX1BO60663 SMG1P2-201ENST00000566127 4221 ntBASIC5.6□□□□□ -1.51
LMX1BO60663 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMX1BO60663 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
LMX1BO60663 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
LMX1BO60663 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.6□□□□□ -1.51
LMX1BO60663 AC105235.1-201ENST00000623208 1816 ntBASIC5.6□□□□□ -1.51
LMX1BO60663 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMX1BO60663 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMX1BO60663 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMX1BO60663 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.6□□□□□ -1.51
LMX1BO60663 HSPD1P8-201ENST00000400121 1658 ntBASIC5.6□□□□□ -1.51
LMX1BO60663 SAGE3P-201ENST00000619800 1635 ntBASIC5.6□□□□□ -1.51
LMX1BO60663 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMX1BO60663 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.6□□□□□ -1.51
LMX1BO60663 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMX1BO60663 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.6□□□□□ -1.51
LMX1BO60663 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LMX1BO60663 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LMX1BO60663 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
LMX1BO60663 OR7A2P-201ENST00000304105 930 ntBASIC5.6□□□□□ -1.51
LMX1BO60663 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.6□□□□□ -1.51
LMX1BO60663 PPIAP24-201ENST00000328558 471 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms