Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC10.53□□□□□ -0.72
CUX2O14529 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
CUX2O14529 AC025470.1-201ENST00000510053 2032 ntBASIC10.53□□□□□ -0.72
CUX2O14529 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
CUX2O14529 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
CUX2O14529 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CUX2O14529 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
CUX2O14529 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CUX2O14529 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
CUX2O14529 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CUX2O14529 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC10.52□□□□□ -0.73
CUX2O14529 CRP-204ENST00000368112 787 ntTSL 2 BASIC10.52□□□□□ -0.73
CUX2O14529 RPS16P5-201ENST00000406501 404 ntBASIC10.52□□□□□ -0.73
CUX2O14529 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CUX2O14529 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC10.52□□□□□ -0.73
CUX2O14529 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC10.52□□□□□ -0.73
CUX2O14529 AC068587.1-201ENST00000483613 781 ntBASIC10.52□□□□□ -0.73
CUX2O14529 IGHV3-57-201ENST00000520143 280 ntBASIC10.52□□□□□ -0.73
CUX2O14529 HMGN2P36-201ENST00000529541 409 ntBASIC10.52□□□□□ -0.73
CUX2O14529 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC10.52□□□□□ -0.73
CUX2O14529 BICD1-206ENST00000551086 423 ntTSL 3 BASIC10.52□□□□□ -0.73
CUX2O14529 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC10.52□□□□□ -0.73
CUX2O14529 MIR8089-201ENST00000620165 82 ntBASIC10.52□□□□□ -0.73
CUX2O14529 GNL2P1-201ENST00000451274 2190 ntBASIC10.52□□□□□ -0.73
CUX2O14529 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC10.52□□□□□ -0.73
CUX2O14529 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CUX2O14529 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CUX2O14529 AC127024.8-201ENST00000623719 2094 ntBASIC10.52□□□□□ -0.73
CUX2O14529 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC10.52□□□□□ -0.73
CUX2O14529 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CUX2O14529 MFSD8-217ENST00000641178 4374 ntBASIC10.51□□□□□ -0.73
CUX2O14529 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CUX2O14529 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC10.51□□□□□ -0.73
CUX2O14529 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CUX2O14529 AC024651.2-201ENST00000562480 2098 ntBASIC10.51□□□□□ -0.73
CUX2O14529 SELENOWP1-201ENST00000322792 252 ntBASIC10.51□□□□□ -0.73
CUX2O14529 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC10.51□□□□□ -0.73
CUX2O14529 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
CUX2O14529 PPIAP10-201ENST00000438675 458 ntBASIC10.51□□□□□ -0.73
CUX2O14529 CEACAMP7-201ENST00000444105 496 ntBASIC10.51□□□□□ -0.73
CUX2O14529 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC10.51□□□□□ -0.73
CUX2O14529 AC100832.1-201ENST00000471945 383 ntBASIC10.51□□□□□ -0.73
CUX2O14529 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC10.51□□□□□ -0.73
CUX2O14529 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC10.51□□□□□ -0.73
CUX2O14529 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC10.51□□□□□ -0.73
CUX2O14529 AC090616.1-201ENST00000583895 447 ntBASIC10.51□□□□□ -0.73
CUX2O14529 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC10.51□□□□□ -0.73
CUX2O14529 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC10.51□□□□□ -0.73
CUX2O14529 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CUX2O14529 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC10.51□□□□□ -0.73
CUX2O14529 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CUX2O14529 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
CUX2O14529 CYP4Z2P-201ENST00000423332 1512 ntBASIC10.51□□□□□ -0.73
CUX2O14529 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CUX2O14529 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
CUX2O14529 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC10.51□□□□□ -0.73
CUX2O14529 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
CUX2O14529 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CUX2O14529 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
CUX2O14529 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
CUX2O14529 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
CUX2O14529 RNU1-46P-201ENST00000384425 164 ntBASIC10.5□□□□□ -0.73
CUX2O14529 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC10.5□□□□□ -0.73
CUX2O14529 AC091390.2-201ENST00000432573 374 ntBASIC10.5□□□□□ -0.73
CUX2O14529 RN7SL269P-201ENST00000467795 305 ntBASIC10.5□□□□□ -0.73
CUX2O14529 RN7SL385P-201ENST00000468873 276 ntBASIC10.5□□□□□ -0.73
CUX2O14529 AC106800.2-201ENST00000514009 1103 ntBASIC10.5□□□□□ -0.73
CUX2O14529 AC092375.1-201ENST00000550410 637 ntBASIC10.5□□□□□ -0.73
CUX2O14529 IGBP1P1-201ENST00000554337 1009 ntBASIC10.5□□□□□ -0.73
CUX2O14529 FAM25E-202ENST00000608562 189 ntBASIC10.5□□□□□ -0.73
CUX2O14529 MIR7641-1-201ENST00000627518 61 ntBASIC10.5□□□□□ -0.73
CUX2O14529 AC087565.3-203ENST00000641018 837 ntBASIC10.5□□□□□ -0.73
CUX2O14529 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CUX2O14529 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC10.5□□□□□ -0.73
CUX2O14529 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC10.5□□□□□ -0.73
CUX2O14529 AL139384.2-201ENST00000613809 3590 ntBASIC10.5□□□□□ -0.73
CUX2O14529 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CUX2O14529 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CUX2O14529 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CUX2O14529 AC012254.3-201ENST00000591183 2117 ntBASIC10.5□□□□□ -0.73
CUX2O14529 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
CUX2O14529 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
CUX2O14529 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
CUX2O14529 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC10.5□□□□□ -0.73
CUX2O14529 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC10.5□□□□□ -0.73
CUX2O14529 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC10.49□□□□□ -0.73
CUX2O14529 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC10.49□□□□□ -0.73
CUX2O14529 PA2G4P6-201ENST00000438325 1197 ntBASIC10.49□□□□□ -0.73
CUX2O14529 AC092967.1-201ENST00000449016 481 ntBASIC10.49□□□□□ -0.73
CUX2O14529 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC10.49□□□□□ -0.73
CUX2O14529 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC10.49□□□□□ -0.73
CUX2O14529 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC10.49□□□□□ -0.73
CUX2O14529 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC10.49□□□□□ -0.73
CUX2O14529 AL645933.2-201ENST00000606743 1207 ntBASIC10.49□□□□□ -0.73
CUX2O14529 AC091953.3-201ENST00000623220 236 ntBASIC10.49□□□□□ -0.73
CUX2O14529 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CUX2O14529 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CUX2O14529 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
CUX2O14529 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CUX2O14529 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms