Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RPA2P3-201ENST00000533268 770 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.84□□□□□ -1.47
UPK1AO00322 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.84□□□□□ -1.47
UPK1AO00322 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.84□□□□□ -1.47
UPK1AO00322 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.84□□□□□ -1.47
UPK1AO00322 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.84□□□□□ -1.47
UPK1AO00322 NPM1P42-201ENST00000560329 862 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.84□□□□□ -1.47
UPK1AO00322 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.84□□□□□ -1.47
UPK1AO00322 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.84□□□□□ -1.47
UPK1AO00322 AC011891.2-201ENST00000604949 397 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 MIR6811-201ENST00000620409 58 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 MIR6823-201ENST00000622118 61 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 AL122023.1-201ENST00000622847 530 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.84□□□□□ -1.47
UPK1AO00322 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.84□□□□□ -1.47
UPK1AO00322 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.84□□□□□ -1.47
UPK1AO00322 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
UPK1AO00322 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.84□□□□□ -1.47
UPK1AO00322 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.84□□□□□ -1.47
UPK1AO00322 AL133243.2-201ENST00000610331 1621 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.84□□□□□ -1.47
UPK1AO00322 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
UPK1AO00322 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.84□□□□□ -1.48
UPK1AO00322 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.83□□□□□ -1.48
UPK1AO00322 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.83□□□□□ -1.48
UPK1AO00322 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
UPK1AO00322 RNU11-201ENST00000387069 134 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
UPK1AO00322 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.83□□□□□ -1.48
UPK1AO00322 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.83□□□□□ -1.48
UPK1AO00322 MTND2P12-201ENST00000417560 1252 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.83□□□□□ -1.48
UPK1AO00322 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.83□□□□□ -1.48
UPK1AO00322 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.83□□□□□ -1.48
UPK1AO00322 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.83□□□□□ -1.48
UPK1AO00322 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.83□□□□□ -1.48
UPK1AO00322 AC016908.1-201ENST00000442571 1219 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 CXCR2P1-202ENST00000443392 1074 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 RPL5P10-201ENST00000445207 894 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.83□□□□□ -1.48
UPK1AO00322 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.83□□□□□ -1.48
UPK1AO00322 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.83□□□□□ -1.48
UPK1AO00322 AC093815.1-201ENST00000508637 280 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 SNORA74.1-201ENST00000516320 180 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.83□□□□□ -1.48
UPK1AO00322 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.83□□□□□ -1.48
UPK1AO00322 AC244502.2-201ENST00000543361 851 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.83□□□□□ -1.48
UPK1AO00322 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
UPK1AO00322 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.83□□□□□ -1.48
UPK1AO00322 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.83□□□□□ -1.48
UPK1AO00322 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
UPK1AO00322 DYNLL1P1-201ENST00000595442 269 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 AC025857.2-201ENST00000602711 238 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 AL360012.1-201ENST00000602813 131 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 AC010998.3-201ENST00000613871 631 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.83□□□□□ -1.48
UPK1AO00322 AC000095.2-202ENST00000637415 154 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 AP001153.1-201ENST00000641024 338 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.83□□□□□ -1.48
UPK1AO00322 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.83□□□□□ -1.48
UPK1AO00322 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.83□□□□□ -1.48
UPK1AO00322 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.83□□□□□ -1.48
UPK1AO00322 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.83□□□□□ -1.48
UPK1AO00322 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.83□□□□□ -1.48
UPK1AO00322 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.83□□□□□ -1.48
UPK1AO00322 AC084782.1-201ENST00000564401 2465 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 LINC01613-201ENST00000561476 2780 ntBASIC5.83□□□□□ -1.48
UPK1AO00322 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
UPK1AO00322 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
UPK1AO00322 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPK1AO00322 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPK1AO00322 AC140134.1-201ENST00000511830 3544 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
UPK1AO00322 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
UPK1AO00322 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
UPK1AO00322 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
UPK1AO00322 AL359955.1-201ENST00000455242 3275 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 RNU1-49P-201ENST00000363468 159 ntBASIC5.82□□□□□ -1.48
UPK1AO00322 RN7SKP38-201ENST00000410782 309 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms