Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 PRELID3BP3-201ENST00000584963 545 ntBASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 AC124916.2-201ENST00000604416 224 ntBASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 SNORA74.4-201ENST00000607595 199 ntBASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 AC025262.3-201ENST00000623666 360 ntBASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 AL357140.4-201ENST00000636827 412 ntBASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 AL353743.3-201ENST00000442109 1468 ntBASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 AKAP17BP-201ENST00000431706 2719 ntBASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TBC1D3FA6NER0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC125238.2-201ENST00000430003 1440 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 RNU6-883P-201ENST00000384597 107 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 OR1F12-201ENST00000402365 945 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AL139805.1-201ENST00000407837 289 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AL035422.1-201ENST00000414193 397 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AL157884.1-201ENST00000424561 454 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AL354707.3-201ENST00000427308 331 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC110602.1-201ENST00000437414 318 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 SDR42E1P3-201ENST00000438345 502 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 SEPT14P12-201ENST00000442280 560 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC010240.2-201ENST00000445363 1205 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC073072.2-201ENST00000447425 348 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 SNX18P24-201ENST00000505249 671 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 OR4A42P-201ENST00000531397 938 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 MIR4310-201ENST00000582950 57 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 VN1R81P-201ENST00000602085 372 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AL157899.1-201ENST00000604110 936 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC073046.2-201ENST00000604756 527 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 OR7M1P-201ENST00000608946 533 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 MIR1910-201ENST00000636955 80 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 MAPK10-365ENST00000641902 3825 ntBASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.43□□□□□ -1.38
TBC1D3FA6NER0 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.42□□□□□ -1.38
TBC1D3FA6NER0 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms