Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ABI1-205ENST00000376139 3516 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
LHX6Q9UPM6 DLEU1-234ENST00000491615 1451 ntTSL 5 BASIC8.56□□□□□ -1.04
LHX6Q9UPM6 FAM13A-212ENST00000508369 3169 ntTSL 5 BASIC8.56□□□□□ -1.04
LHX6Q9UPM6 TPTE-201ENST00000427445 2036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
LHX6Q9UPM6 PPP2R5D-203ENST00000461010 1558 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
LHX6Q9UPM6 SPDYE9P-202ENST00000571071 2024 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LHX6Q9UPM6 SPDYE11-203ENST00000573748 2024 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LHX6Q9UPM6 SPDYE10P-201ENST00000576332 2021 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LHX6Q9UPM6 AC093426.1-201ENST00000561926 3011 ntBASIC8.56□□□□□ -1.04
LHX6Q9UPM6 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
LHX6Q9UPM6 FAM13A-222ENST00000515600 2206 ntAPPRIS ALT2 TSL 3 BASIC8.56□□□□□ -1.04
LHX6Q9UPM6 THADA-202ENST00000402360 2974 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 ANKRD1-201ENST00000371697 1979 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 PAK3-212ENST00000519681 2638 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 SEZ6-204ENST00000442608 3805 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 VTA1-205ENST00000620996 3272 ntTSL 3 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 NRXN3-215ENST00000557594 3381 ntTSL 2 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 OR2A20P-204ENST00000641121 2173 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 ITGB6-201ENST00000283249 4675 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 SLC9A6-207ENST00000636092 4697 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 SEC16B-204ENST00000464631 2948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 PARP14-202ENST00000474629 7915 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 NPHP1-202ENST00000355301 1932 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 RHAG-202ENST00000371175 1912 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 TMEM254-205ENST00000372281 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 SSX2-202ENST00000337502 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 RAB19-201ENST00000356407 822 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC009967.1-201ENST00000379462 793 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 YWHAZ-202ENST00000395948 812 ntTSL 3 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 TMBIM7P-201ENST00000418074 855 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AL953862.1-201ENST00000423016 168 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 HMGN2P24-201ENST00000433516 273 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 PPIAP17-201ENST00000438507 471 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 PA2G4P1-201ENST00000442248 1197 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AL035417.1-201ENST00000442754 214 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 RN7SL757P-201ENST00000466709 301 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC087501.2-201ENST00000466869 581 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 RN7SL505P-201ENST00000482644 293 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 HMGB1P19-201ENST00000517578 577 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 ARL6IP1P3-201ENST00000524544 560 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC105219.3-201ENST00000527579 374 ntTSL 2 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AP006587.5-201ENST00000532033 739 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 APOOP3-201ENST00000536787 586 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 RAB19-203ENST00000537763 952 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 WTAPP1-203ENST00000537774 400 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC243312.1-201ENST00000570582 275 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC002059.1-201ENST00000608014 477 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC018554.3-201ENST00000614215 1026 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 uc_338.15-201ENST00000615470 191 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 ST7-OT3_2.1-201ENST00000617884 137 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AL139093.1-201ENST00000622029 1014 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 CRISP2-202ENST00000616725 1376 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AGBL4-202ENST00000371836 1454 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 VSIG4-202ENST00000412866 1474 ntTSL 2 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 BZW2-202ENST00000405202 1689 ntTSL 5 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 CD207-201ENST00000410009 1869 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 AC119674.1-202ENST00000641333 1860 ntBASIC8.55□□□□□ -1.04
LHX6Q9UPM6 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 GRB10-203ENST00000398810 4785 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 C1QTNF3-AMACR-201ENST00000382079 3424 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 RPL23AP7-202ENST00000416673 2078 ntTSL 2 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 TNFRSF10D-201ENST00000312584 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 FCGR3B-201ENST00000294800 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 ZNF615-202ENST00000391795 2698 ntTSL 2 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC8.55□□□□□ -1.04
LHX6Q9UPM6 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms