Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC090651.1-201ENST00000567865 634 ntBASIC6.55□□□□□ -1.36
CISHQ9NSE2 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 AC124916.2-201ENST00000604416 224 ntBASIC6.55□□□□□ -1.36
CISHQ9NSE2 AC073389.3-201ENST00000609434 935 ntBASIC6.55□□□□□ -1.36
CISHQ9NSE2 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CISHQ9NSE2 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CISHQ9NSE2 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CISHQ9NSE2 AC241584.2-201ENST00000637142 2090 ntBASIC6.54□□□□□ -1.36
CISHQ9NSE2 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CISHQ9NSE2 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
CISHQ9NSE2 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CISHQ9NSE2 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CISHQ9NSE2 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 AC130360.1-201ENST00000425489 1117 ntBASIC6.54□□□□□ -1.36
CISHQ9NSE2 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 AC093166.3-201ENST00000448785 303 ntBASIC6.54□□□□□ -1.36
CISHQ9NSE2 PPIAP7-201ENST00000454070 489 ntBASIC6.54□□□□□ -1.36
CISHQ9NSE2 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.54□□□□□ -1.36
CISHQ9NSE2 CR383658.1-201ENST00000514609 734 ntBASIC6.54□□□□□ -1.36
CISHQ9NSE2 AC130365.2-201ENST00000525882 1201 ntBASIC6.54□□□□□ -1.36
CISHQ9NSE2 AP000620.1-201ENST00000527147 504 ntBASIC6.54□□□□□ -1.36
CISHQ9NSE2 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CISHQ9NSE2 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 MIR4502-201ENST00000580432 81 ntBASIC6.54□□□□□ -1.36
CISHQ9NSE2 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CISHQ9NSE2 AL512652.1-201ENST00000619006 500 ntBASIC6.54□□□□□ -1.36
CISHQ9NSE2 AL034408.1-201ENST00000637712 664 ntBASIC6.54□□□□□ -1.36
CISHQ9NSE2 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 AL121768.1-201ENST00000613917 2544 ntBASIC6.54□□□□□ -1.36
CISHQ9NSE2 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.54□□□□□ -1.36
CISHQ9NSE2 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CISHQ9NSE2 Z93929.1-201ENST00000418200 1475 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CISHQ9NSE2 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
CISHQ9NSE2 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
CISHQ9NSE2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CISHQ9NSE2 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
CISHQ9NSE2 AL132875.1-201ENST00000403623 949 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 RPS7P8-201ENST00000418311 581 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 RPL35AP31-201ENST00000418340 337 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 AC023141.3-201ENST00000436698 278 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 SEPT14P12-201ENST00000442280 560 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 OR52I1-201ENST00000450052 1050 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 AC118758.1-202ENST00000454719 225 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 AC007346.1-201ENST00000569208 867 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 AC073333.2-201ENST00000603589 769 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 AC092681.3-201ENST00000609463 678 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 AL591926.1-201ENST00000620542 217 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 AC119674.1-202ENST00000641333 1860 ntBASIC6.53□□□□□ -1.36
CISHQ9NSE2 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.53□□□□□ -1.36
CISHQ9NSE2 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
CISHQ9NSE2 AL139805.2-201ENST00000455305 2433 ntBASIC6.52□□□□□ -1.36
CISHQ9NSE2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
CISHQ9NSE2 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CISHQ9NSE2 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CISHQ9NSE2 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 AC068733.2-201ENST00000605434 1418 ntBASIC6.52□□□□□ -1.37
CISHQ9NSE2 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CISHQ9NSE2 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.52□□□□□ -1.37
CISHQ9NSE2 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms