Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC104772.1-201ENST00000444764 862 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 MRPL35P2-201ENST00000448009 511 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 PRDX1P1-201ENST00000449329 596 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 RN7SL395P-201ENST00000462960 291 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 RPS2P25-201ENST00000467247 580 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 RPL7P16-201ENST00000479738 738 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 RPL7P41-201ENST00000485823 957 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 CR383658.1-201ENST00000514609 734 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 RNU6-319P-201ENST00000516025 108 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC023827.2-201ENST00000566880 1061 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 TUBAP4-201ENST00000569261 416 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 EIF1P4-201ENST00000572664 335 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC022662.1-201ENST00000580252 331 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC005771.1-201ENST00000585581 349 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 LINC01515-207ENST00000598092 496 ntTSL 3 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 BICRA-AS1-201ENST00000598376 547 ntTSL 4 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC093063.1-201ENST00000599317 363 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 AL136363.2-201ENST00000604173 851 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC016394.1-201ENST00000608444 833 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 VN1R74P-201ENST00000613259 503 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC007204.2-201ENST00000615022 616 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 MIR7848-201ENST00000617402 101 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 LINC02086-204ENST00000628006 786 ntTSL 5 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 SMG7-216ENST00000638826 219 ntTSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 SGO1P2-201ENST00000429458 1589 ntBASIC7.19□□□□□ -1.26
SSU72Q9NP77 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.19□□□□□ -1.26
SSU72Q9NP77 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SSU72Q9NP77 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 SALL4P7-201ENST00000555779 3120 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AL133268.1-201ENST00000405676 1401 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 NBPF8-201ENST00000583271 5330 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC083806.2-201ENST00000617795 2685 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AL358913.2-201ENST00000553881 1548 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 ZNF849P-201ENST00000594711 1566 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 MIR345-201ENST00000362114 98 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 RN7SKP36-201ENST00000363997 312 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 RNU4-59P-201ENST00000364447 116 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 MIR654-201ENST00000385199 81 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 MOB4-205ENST00000409916 829 ntTSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SSU72Q9NP77 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 SEPT14P24-201ENST00000447236 180 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 MTCYBP1-201ENST00000454315 1119 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 CCNB1IP1P3-201ENST00000454702 829 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 RNU7-157P-201ENST00000459600 66 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC008967.1-201ENST00000504843 163 ntBASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
SSU72Q9NP77 AC073581.1-201ENST00000519036 575 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms