Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 ARGFXP2-201ENST00000579304 949 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 RPS4XP21-201ENST00000603814 750 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 AC111186.1-201ENST00000604684 130 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 AC026951.2-201ENST00000613847 241 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 MIR6849-201ENST00000618543 69 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 AL109924.4-201ENST00000623089 670 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 AC015660.5-201ENST00000623238 564 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.52□□□□□ -1.53
SSX3Q99909 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SSX3Q99909 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX3Q99909 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
SSX3Q99909 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 AL731556.1-201ENST00000394628 3711 ntBASIC5.52□□□□□ -1.53
SSX3Q99909 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.52□□□□□ -1.53
SSX3Q99909 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.52□□□□□ -1.53
SSX3Q99909 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
SSX3Q99909 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
SSX3Q99909 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SSX3Q99909 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX3Q99909 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 AC087516.1-201ENST00000561236 2428 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 AL353133.1-201ENST00000407695 401 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX3Q99909 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 GAPDHP57-201ENST00000424400 585 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.51□□□□□ -1.53
SSX3Q99909 ETF1P1-206ENST00000427296 984 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 E2F6P3-201ENST00000441743 743 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX3Q99909 AL034369.1-201ENST00000453808 477 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 AC019084.1-201ENST00000457337 432 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 AC117395.1-201ENST00000487390 403 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 RN7SL37P-201ENST00000490461 307 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 H3F3AP3-201ENST00000497682 407 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 LECT2-203ENST00000512872 762 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX3Q99909 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX3Q99909 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
SSX3Q99909 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 KCTD9P4-201ENST00000526766 1166 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 AP001804.2-201ENST00000533932 910 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 TRAV11-201ENST00000539512 339 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 AL591767.3-201ENST00000554632 525 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 AL121839.1-201ENST00000556233 1185 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.51□□□□□ -1.53
SSX3Q99909 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 HTR1DP1-201ENST00000616500 888 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 AC002044.3-201ENST00000623314 541 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 AC027559.1-201ENST00000636288 271 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SSX3Q99909 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SSX3Q99909 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 AP002370.1-201ENST00000528055 1602 ntBASIC5.51□□□□□ -1.53
SSX3Q99909 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.51□□□□□ -1.53
SSX3Q99909 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SSX3Q99909 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.51□□□□□ -1.53
SSX3Q99909 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.5□□□□□ -1.53
SSX3Q99909 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SSX3Q99909 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
SSX3Q99909 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
SSX3Q99909 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX3Q99909 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.5□□□□□ -1.53
SSX3Q99909 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SSX3Q99909 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms