Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AC019178.1-201ENST00000392337 440 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 FABP12P1-201ENST00000401911 322 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AL133260.1-201ENST00000405720 405 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 BTF3L4P1-201ENST00000413813 468 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 MFSD13B-201ENST00000420133 1290 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AC046176.1-201ENST00000435260 1170 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AC092447.2-201ENST00000435487 669 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AC114755.4-201ENST00000439114 443 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 OR10R1P-201ENST00000441524 1141 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AC002486.2-201ENST00000447806 590 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 MTCO3P16-201ENST00000454456 754 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AP002345.1-201ENST00000456493 928 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 RN7SL390P-201ENST00000470634 284 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 RN7SL205P-201ENST00000490174 284 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 SNORA3.4-201ENST00000515969 96 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 TRIM51DP-201ENST00000529746 596 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 CBLN2-203ENST00000581073 537 ntTSL 4 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AL390877.1-201ENST00000605704 214 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AL139407.1-201ENST00000613826 1175 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AP002782.1-201ENST00000623107 614 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 AC006927.3-201ENST00000638789 384 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 CASC19-212ENST00000641153 1287 ntBASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC7.95□□□□□ -1.14
SYNGAP1Q96PV0 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 RN7SKP149-201ENST00000363008 344 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AL121978.1-201ENST00000402778 359 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 NIFKP3-201ENST00000417799 865 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 TIMM9P2-201ENST00000419324 266 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 UBE2D3P1-201ENST00000436669 444 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 NPM1P23-201ENST00000440193 849 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 RN7SL160P-201ENST00000468558 284 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC008945.1-201ENST00000505144 499 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 PCNAP1-201ENST00000505363 709 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC146944.3-201ENST00000509969 371 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 MTCYBP44-201ENST00000514835 823 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC027801.3-201ENST00000515049 698 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC134698.4-201ENST00000523451 826 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 PPIAP6-201ENST00000557078 499 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC009094.1-201ENST00000564443 426 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 FAM60CP-201ENST00000591086 664 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC104184.1-201ENST00000607513 721 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AC005858.3-201ENST00000624756 589 ntBASIC7.94□□□□□ -1.14
SYNGAP1Q96PV0 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms