Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLHC1Q8NHS4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AC092692.1-201ENST00000623625 2595 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AC003045.1-201ENST00000398779 713 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 ZNF37CP-201ENST00000406795 241 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AC117434.1-201ENST00000419971 836 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 COX4I1P2-201ENST00000447446 547 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AC112187.1-201ENST00000455837 479 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 RANP2-201ENST00000456833 229 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AC005017.1-201ENST00000482002 490 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 RN7SKP248-201ENST00000516278 305 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AP001804.1-201ENST00000526868 919 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AP000619.2-201ENST00000546014 969 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AC036176.3-201ENST00000602456 418 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AL031658.2-201ENST00000616850 651 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AC116667.2-201ENST00000641075 823 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AC083837.1-201ENST00000565297 2994 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 AL136984.1-201ENST00000607611 1893 ntBASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLHC1Q8NHS4 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AL121839.2-201ENST00000565058 6943 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 SNORA70.9-201ENST00000384370 135 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AC245884.2-201ENST00000426257 404 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AL161722.1-201ENST00000446972 1032 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 NPM1P9-201ENST00000453156 844 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 RN7SL83P-201ENST00000468131 297 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 CR383656.1-201ENST00000484916 377 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AC027796.1-201ENST00000575593 512 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AC024267.2-201ENST00000582737 417 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AC009237.12-201ENST00000604755 742 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AL589743.6-201ENST00000611025 117 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 AL138960.1-201ENST00000613838 513 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 MIR6503-201ENST00000622884 86 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 CLUHP10-201ENST00000631979 980 ntBASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLHC1Q8NHS4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms