Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 RN7SKP281-201ENST00000410472 352 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AC115283.1-201ENST00000427353 400 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 KCTD9P1-201ENST00000430462 1167 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AC069154.1-201ENST00000432914 542 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 MED28P4-201ENST00000433137 572 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 RPS10P18-201ENST00000442662 495 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 RPL5P7-201ENST00000444235 813 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 HMGB1P7-201ENST00000450921 612 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 RPL23AP64-201ENST00000469465 435 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AC022206.1-201ENST00000495947 347 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AC083906.1-201ENST00000509298 406 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 IGLV3-6-201ENST00000523937 250 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 HNRNPCP1-201ENST00000556181 766 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AL157899.1-201ENST00000604110 936 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AC073046.2-201ENST00000604756 527 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 MRPL57P1-201ENST00000621486 265 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AC119674.1-213ENST00000641177 1386 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AC097634.1-201ENST00000604491 2467 ntBASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.37□□□□□ -1.55
CLDND2Q8NHS1 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 LCN1P2-201ENST00000372030 223 ntBASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AL139805.1-201ENST00000407837 289 ntBASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 VN1R3-201ENST00000418822 919 ntBASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AL358876.1-201ENST00000453364 1075 ntBASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 Z83838.1-202ENST00000456225 839 ntBASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AP002453.1-201ENST00000492327 668 ntBASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 IGKV2-19-201ENST00000518132 283 ntBASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AP005639.1-201ENST00000526939 192 ntBASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 TPRX1P1-201ENST00000557620 319 ntBASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AC124916.2-201ENST00000604416 224 ntBASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AC005393.1-201ENST00000617916 584 ntBASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 SAGE3P-201ENST00000619800 1635 ntBASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CLDND2Q8NHS1 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.35□□□□□ -1.55
CLDND2Q8NHS1 AC110373.1-201ENST00000505994 3505 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms