Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AP002004.1-206ENST00000532441 876 ntBASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC069240.2-201ENST00000550242 609 ntBASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC093671.1-201ENST00000624981 2929 ntBASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC016745.2-201ENST00000608834 3443 ntBASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC138907.8-201ENST00000623981 2256 ntBASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 AC009506.2-201ENST00000420635 840 ntBASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 AC234771.4-201ENST00000441416 730 ntBASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 RN7SL790P-201ENST00000474043 298 ntBASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 RN7SL502P-201ENST00000481857 290 ntBASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 AP005902.2-201ENST00000518393 307 ntBASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 IGKV2D-38-201ENST00000518423 240 ntBASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 OR6M2P-201ENST00000529831 871 ntBASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 NIFKP4-201ENST00000567275 1192 ntBASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 RN7SL66P-201ENST00000582099 264 ntBASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 AC019257.2-201ENST00000605539 497 ntBASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC112Q8NEF3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 AC109446.4-201ENST00000623235 2755 ntBASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 NPM1P9-201ENST00000453156 844 ntBASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 AC112187.1-201ENST00000455837 479 ntBASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 RN7SL372P-201ENST00000461982 298 ntBASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 SNRPCP11-201ENST00000492453 205 ntBASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 MIR378C-201ENST00000578683 81 ntBASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 NPIPB1P-202ENST00000588786 828 ntBASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 AP001541.1-201ENST00000623322 1904 ntBASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 BRAFP1-201ENST00000445336 2703 ntBASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC112Q8NEF3 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AL590635.1-201ENST00000406314 586 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 RN7SKP221-201ENST00000410420 301 ntBASIC6.84□□□□□ -1.31
CCDC112Q8NEF3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms