Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC090826.1-203ENST00000569235 490 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 TUBAP4-201ENST00000569261 416 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDH1Q08174 RBM4-213ENST00000578778 582 ntTSL 4 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC010327.2-201ENST00000587647 488 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC090181.2-201ENST00000602975 672 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AL353621.2-201ENST00000605340 133 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AL109618.2-201ENST00000605527 211 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 DLEU2_1.1-201ENST00000612089 120 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AC024941.1-201ENST00000612250 334 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 DLEU2_1.2-201ENST00000614667 120 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AL359314.1-201ENST00000616913 261 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 MIAT_exon1.1-201ENST00000617016 135 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC015722.2-201ENST00000622210 551 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AL357562.1-201ENST00000624911 609 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC7.3□□□□□ -1.24
PCDH1Q08174 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PCDH1Q08174 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
PCDH1Q08174 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH1Q08174 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC7.3□□□□□ -1.24
PCDH1Q08174 AC017007.4-201ENST00000503353 1352 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AC093844.1-201ENST00000514910 1361 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 AL591543.1-202ENST00000642095 4149 ntBASIC7.3□□□□□ -1.24
PCDH1Q08174 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH1Q08174 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
PCDH1Q08174 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH1Q08174 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.3□□□□□ -1.24
PCDH1Q08174 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
PCDH1Q08174 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
PCDH1Q08174 AC007342.7-201ENST00000624610 2337 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH1Q08174 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH1Q08174 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
PCDH1Q08174 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH1Q08174 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 MTCO1P25-201ENST00000414449 1799 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC7.29□□□□□ -1.24
PCDH1Q08174 AL078595.2-201ENST00000605309 1780 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 MTCO1P28-201ENST00000574177 1528 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 OR51A10P-201ENST00000307165 937 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 RNU1-21P-201ENST00000363327 163 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDH1Q08174 RPL5P5-201ENST00000392009 893 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 DEFB108C-201ENST00000400154 252 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 AL161449.1-201ENST00000414531 1199 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH1Q08174 AC004986.1-201ENST00000414855 607 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 LINC01811-202ENST00000424786 787 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDH1Q08174 SNX18P3-201ENST00000424993 835 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 RPL5P34-201ENST00000426545 891 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 RPE-205ENST00000429907 925 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH1Q08174 PYHIN5P-201ENST00000431627 723 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 MTND3P1-201ENST00000441336 220 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDH1Q08174 SS18L2P1-201ENST00000445923 213 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 AC007000.1-201ENST00000453064 794 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 MEF2AP1-201ENST00000454867 863 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDH1Q08174 RN7SL508P-201ENST00000464472 303 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 RPL35AP19-201ENST00000469425 329 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDH1Q08174 RN7SL332P-201ENST00000482163 254 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC7.29□□□□□ -1.24
PCDH1Q08174 DPH5-211ENST00000488176 1034 ntAPPRIS P4 TSL 3 BASIC7.29□□□□□ -1.24
PCDH1Q08174 AL024509.2-201ENST00000493462 493 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
PCDH1Q08174 AC084024.2-201ENST00000503480 791 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.29□□□□□ -1.24
PCDH1Q08174 AC112198.1-201ENST00000505369 1220 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.29□□□□□ -1.24
PCDH1Q08174 AC109464.2-201ENST00000510242 943 ntBASIC7.29□□□□□ -1.24
PCDH1Q08174 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDH1Q08174 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDH1Q08174 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC7.29□□□□□ -1.24
PCDH1Q08174 IGLV10-67-201ENST00000519446 325 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms