Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 MIR191-201ENST00000384873 92 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AL157702.1-201ENST00000398764 426 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 AL133260.1-201ENST00000405720 405 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 RN7SKP146-201ENST00000410242 334 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 RN7SKP38-201ENST00000410782 309 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 SOCS5P1-201ENST00000440415 949 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 AC245291.3-201ENST00000443400 292 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 GAPDHP23-201ENST00000444823 993 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AL133351.3-201ENST00000454998 193 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 RPL5P12-201ENST00000477071 851 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 AL035690.1-201ENST00000490892 383 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 RNA5SP116-201ENST00000516132 98 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AP001858.2-201ENST00000536213 601 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 BTG1P1-201ENST00000540396 508 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 GLYATL1P2-202ENST00000588046 902 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AC016590.3-201ENST00000611171 753 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AC010998.3-201ENST00000613871 631 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 AC244100.4-201ENST00000617747 388 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 AL137067.2-201ENST00000621202 131 ntBASIC5.95□□□□□ -1.46
HMGCS1Q01581 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGCS1Q01581 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HMGCS1Q01581 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS1Q01581 ZNF969P-201ENST00000510345 2341 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC024587.1-201ENST00000505925 2157 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS1Q01581 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS1Q01581 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS1Q01581 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS1Q01581 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGCS1Q01581 RNU1-49P-201ENST00000363468 159 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 SNORA70.9-201ENST00000384370 135 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 YWHAZP4-201ENST00000392459 708 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 AL121835.1-201ENST00000404250 354 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC017035.1-201ENST00000411999 1115 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 CXCR2P1-202ENST00000443392 1074 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 OR2L9P-201ENST00000444456 913 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 RPS7P10-201ENST00000464254 603 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 SNX18P24-201ENST00000505249 671 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 Y_RNA.710-201ENST00000516975 110 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC124891.1-201ENST00000536322 519 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 TDGP1-201ENST00000543961 1229 ntBASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGCS1Q01581 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms