Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC122713.2-201ENST00000624942 3335 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NKX6-1P78426 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
NKX6-1P78426 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 AC018688.1-201ENST00000636528 1754 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NKX6-1P78426 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NKX6-1P78426 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NKX6-1P78426 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 AC092634.1-201ENST00000366505 199 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 RNU6-481P-201ENST00000384194 107 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NKX6-1P78426 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 VN1R12P-201ENST00000403778 876 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.19□□□□□ -1.42
NKX6-1P78426 AP003385.1-201ENST00000426387 893 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.19□□□□□ -1.42
NKX6-1P78426 MTCYBP15-201ENST00000433123 1127 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 MTND2P2-201ENST00000434633 945 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.19□□□□□ -1.42
NKX6-1P78426 AC044797.1-201ENST00000445744 679 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.19□□□□□ -1.42
NKX6-1P78426 AL358876.1-201ENST00000453364 1075 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC6.19□□□□□ -1.42
NKX6-1P78426 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.19□□□□□ -1.42
NKX6-1P78426 GLRXP3-201ENST00000470810 321 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 AC066616.1-201ENST00000486795 413 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.19□□□□□ -1.42
NKX6-1P78426 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC6.19□□□□□ -1.42
NKX6-1P78426 RN7SKP141-201ENST00000516167 338 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 SAA3P-201ENST00000533267 365 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.19□□□□□ -1.42
NKX6-1P78426 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.19□□□□□ -1.42
NKX6-1P78426 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.19□□□□□ -1.42
NKX6-1P78426 PRR13P5-201ENST00000596581 442 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 AC092032.1-201ENST00000603090 165 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 AP002802.2-201ENST00000605877 235 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.19□□□□□ -1.42
NKX6-1P78426 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 AC211486.4-201ENST00000621495 113 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.19□□□□□ -1.42
NKX6-1P78426 AC097655.1-201ENST00000635075 318 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 AC083865.1-201ENST00000636634 831 ntBASIC6.19□□□□□ -1.42
NKX6-1P78426 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
NKX6-1P78426 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
NKX6-1P78426 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
NKX6-1P78426 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
NKX6-1P78426 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
NKX6-1P78426 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.19□□□□□ -1.42
NKX6-1P78426 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.19□□□□□ -1.42
NKX6-1P78426 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.19□□□□□ -1.42
NKX6-1P78426 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.19□□□□□ -1.42
NKX6-1P78426 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NKX6-1P78426 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.19□□□□□ -1.42
NKX6-1P78426 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.18□□□□□ -1.42
NKX6-1P78426 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NKX6-1P78426 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
NKX6-1P78426 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.18□□□□□ -1.42
NKX6-1P78426 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NKX6-1P78426 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NKX6-1P78426 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NKX6-1P78426 LPAL2-203ENST00000454031 2498 ntBASIC6.18□□□□□ -1.42
NKX6-1P78426 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NKX6-1P78426 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NKX6-1P78426 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.18□□□□□ -1.42
NKX6-1P78426 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NKX6-1P78426 SNORA70.5-201ENST00000365519 135 ntBASIC6.18□□□□□ -1.42
NKX6-1P78426 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NKX6-1P78426 RNA5SP53-201ENST00000391299 120 ntBASIC6.18□□□□□ -1.42
NKX6-1P78426 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
NKX6-1P78426 UBE2V1P11-201ENST00000411559 285 ntBASIC6.18□□□□□ -1.42
NKX6-1P78426 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC6.18□□□□□ -1.42
NKX6-1P78426 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC6.18□□□□□ -1.42
NKX6-1P78426 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.18□□□□□ -1.42
NKX6-1P78426 RPL3P11-201ENST00000434028 1146 ntBASIC6.18□□□□□ -1.42
NKX6-1P78426 AC092447.2-201ENST00000435487 669 ntBASIC6.18□□□□□ -1.42
NKX6-1P78426 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms