Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.11□□□□□ -1.43
RAE1P78406 AC119674.1-213ENST00000641177 1386 ntBASIC6.11□□□□□ -1.43
RAE1P78406 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 SNORA72.3-201ENST00000365074 132 ntBASIC6.11□□□□□ -1.43
RAE1P78406 AC245036.1-201ENST00000391727 309 ntBASIC6.11□□□□□ -1.43
RAE1P78406 PTGES3P2-201ENST00000407942 482 ntBASIC6.11□□□□□ -1.43
RAE1P78406 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 RN7SKP281-201ENST00000410472 352 ntBASIC6.11□□□□□ -1.43
RAE1P78406 RN7SKP205-201ENST00000410999 307 ntBASIC6.11□□□□□ -1.43
RAE1P78406 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.11□□□□□ -1.43
RAE1P78406 AL589794.1-201ENST00000424971 390 ntBASIC6.11□□□□□ -1.43
RAE1P78406 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.11□□□□□ -1.43
RAE1P78406 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.11□□□□□ -1.43
RAE1P78406 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.11□□□□□ -1.43
RAE1P78406 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 AC092967.1-201ENST00000449016 481 ntBASIC6.11□□□□□ -1.43
RAE1P78406 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.11□□□□□ -1.43
RAE1P78406 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.11□□□□□ -1.43
RAE1P78406 RN7SL83P-201ENST00000468131 297 ntBASIC6.11□□□□□ -1.43
RAE1P78406 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.11□□□□□ -1.43
RAE1P78406 RPL5P33-201ENST00000487833 905 ntBASIC6.11□□□□□ -1.43
RAE1P78406 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.11□□□□□ -1.43
RAE1P78406 RPL17P2-201ENST00000491913 451 ntBASIC6.11□□□□□ -1.43
RAE1P78406 AC093763.2-201ENST00000505334 1223 ntBASIC6.11□□□□□ -1.43
RAE1P78406 AC093664.1-201ENST00000511779 289 ntBASIC6.11□□□□□ -1.43
RAE1P78406 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.11□□□□□ -1.43
RAE1P78406 MINOS1P4-201ENST00000515470 318 ntBASIC6.11□□□□□ -1.43
RAE1P78406 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.11□□□□□ -1.43
RAE1P78406 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.11□□□□□ -1.43
RAE1P78406 AC106785.3-201ENST00000564064 847 ntBASIC6.11□□□□□ -1.43
RAE1P78406 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.11□□□□□ -1.43
RAE1P78406 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.11□□□□□ -1.43
RAE1P78406 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.11□□□□□ -1.43
RAE1P78406 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.11□□□□□ -1.43
RAE1P78406 RPL7AP69-201ENST00000595306 806 ntBASIC6.11□□□□□ -1.43
RAE1P78406 AC073046.2-201ENST00000604756 527 ntBASIC6.11□□□□□ -1.43
RAE1P78406 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.11□□□□□ -1.43
RAE1P78406 AL008723.3-201ENST00000608926 449 ntBASIC6.11□□□□□ -1.43
RAE1P78406 MIR6070-201ENST00000613967 103 ntBASIC6.11□□□□□ -1.43
RAE1P78406 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.11□□□□□ -1.43
RAE1P78406 AL445493.3-201ENST00000619568 477 ntBASIC6.11□□□□□ -1.43
RAE1P78406 AP006248.3-201ENST00000623580 594 ntBASIC6.11□□□□□ -1.43
RAE1P78406 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC6.11□□□□□ -1.43
RAE1P78406 LINC02495-203ENST00000636704 242 ntBASIC6.11□□□□□ -1.43
RAE1P78406 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.11□□□□□ -1.43
RAE1P78406 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.11□□□□□ -1.43
RAE1P78406 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.11□□□□□ -1.43
RAE1P78406 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.11□□□□□ -1.43
RAE1P78406 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
RAE1P78406 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
RAE1P78406 AC011369.2-201ENST00000624423 1567 ntBASIC6.1□□□□□ -1.43
RAE1P78406 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.1□□□□□ -1.43
RAE1P78406 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RAE1P78406 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.1□□□□□ -1.43
RAE1P78406 DDX6P1-205ENST00000441966 1436 ntBASIC6.1□□□□□ -1.43
RAE1P78406 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RAE1P78406 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RAE1P78406 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
RAE1P78406 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.1□□□□□ -1.43
RAE1P78406 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
RAE1P78406 GCNT6-201ENST00000379591 934 ntBASIC6.1□□□□□ -1.43
RAE1P78406 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RAE1P78406 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.1□□□□□ -1.43
RAE1P78406 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.1□□□□□ -1.43
RAE1P78406 RN7SKP161-201ENST00000411110 305 ntBASIC6.1□□□□□ -1.43
RAE1P78406 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.1□□□□□ -1.43
RAE1P78406 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.1□□□□□ -1.43
RAE1P78406 MTCYBP32-201ENST00000427945 1084 ntBASIC6.1□□□□□ -1.43
RAE1P78406 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RAE1P78406 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.1□□□□□ -1.43
RAE1P78406 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RAE1P78406 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.1□□□□□ -1.43
RAE1P78406 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.1□□□□□ -1.43
RAE1P78406 SUMO2P1-206ENST00000445436 284 ntBASIC6.1□□□□□ -1.43
RAE1P78406 AC108751.3-201ENST00000461814 1020 ntBASIC6.1□□□□□ -1.43
RAE1P78406 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.1□□□□□ -1.43
RAE1P78406 RN7SL790P-201ENST00000474043 298 ntBASIC6.1□□□□□ -1.43
RAE1P78406 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
RAE1P78406 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.1□□□□□ -1.43
RAE1P78406 AC018645.1-201ENST00000505003 109 ntBASIC6.1□□□□□ -1.43
RAE1P78406 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.1□□□□□ -1.43
RAE1P78406 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.1□□□□□ -1.43
RAE1P78406 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RAE1P78406 MTND2P17-201ENST00000550281 688 ntBASIC6.1□□□□□ -1.43
RAE1P78406 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC6.1□□□□□ -1.43
RAE1P78406 CHEK2P2-201ENST00000554701 672 ntBASIC6.1□□□□□ -1.43
RAE1P78406 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.1□□□□□ -1.43
RAE1P78406 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC6.1□□□□□ -1.43
RAE1P78406 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.1□□□□□ -1.43
RAE1P78406 AC015911.5-201ENST00000587076 451 ntBASIC6.1□□□□□ -1.43
RAE1P78406 AC006116.7-201ENST00000590141 756 ntBASIC6.1□□□□□ -1.43
RAE1P78406 AC012175.1-201ENST00000603755 531 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms