Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC092121.1-201ENST00000569452 202 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.17□□□□□ -1.26
CCNA1P78396 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.17□□□□□ -1.26
CCNA1P78396 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.17□□□□□ -1.26
CCNA1P78396 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCNA1P78396 AL359704.2-201ENST00000604335 521 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 AC108673.3-201ENST00000609183 335 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 AC126175.1-201ENST00000617041 758 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.17□□□□□ -1.26
CCNA1P78396 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.17□□□□□ -1.26
CCNA1P78396 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CCNA1P78396 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC7.17□□□□□ -1.26
CCNA1P78396 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCNA1P78396 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCNA1P78396 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.17□□□□□ -1.26
CCNA1P78396 AL596244.1-201ENST00000567068 3779 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCNA1P78396 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CCNA1P78396 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCNA1P78396 AL391262.1-201ENST00000556558 1992 ntBASIC7.17□□□□□ -1.26
CCNA1P78396 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCNA1P78396 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CCNA1P78396 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.16□□□□□ -1.26
CCNA1P78396 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.16□□□□□ -1.26
CCNA1P78396 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CCNA1P78396 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.16□□□□□ -1.26
CCNA1P78396 AC007114.2-201ENST00000576014 4281 ntBASIC7.16□□□□□ -1.26
CCNA1P78396 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CCNA1P78396 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CCNA1P78396 AC087752.1-201ENST00000391360 558 ntBASIC7.16□□□□□ -1.26
CCNA1P78396 EEF1B2P8-201ENST00000414101 671 ntBASIC7.16□□□□□ -1.26
CCNA1P78396 RPL12P12-201ENST00000424633 501 ntBASIC7.16□□□□□ -1.26
CCNA1P78396 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.16□□□□□ -1.26
CCNA1P78396 TRIM60P16-201ENST00000444048 694 ntBASIC7.16□□□□□ -1.26
CCNA1P78396 AC074386.1-201ENST00000476560 767 ntBASIC7.16□□□□□ -1.26
CCNA1P78396 RN7SL273P-201ENST00000481561 299 ntBASIC7.16□□□□□ -1.26
CCNA1P78396 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC7.16□□□□□ -1.26
CCNA1P78396 RNA5SP438-201ENST00000516561 112 ntBASIC7.16□□□□□ -1.26
CCNA1P78396 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CCNA1P78396 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.16□□□□□ -1.26
CCNA1P78396 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.16□□□□□ -1.26
CCNA1P78396 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.16□□□□□ -1.26
CCNA1P78396 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.16□□□□□ -1.26
CCNA1P78396 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.16□□□□□ -1.26
CCNA1P78396 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.16□□□□□ -1.26
CCNA1P78396 AL008723.3-201ENST00000608926 449 ntBASIC7.16□□□□□ -1.26
CCNA1P78396 AL445647.2-201ENST00000615170 130 ntBASIC7.16□□□□□ -1.26
CCNA1P78396 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.16□□□□□ -1.26
CCNA1P78396 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.16□□□□□ -1.26
CCNA1P78396 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CCNA1P78396 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 NEK2P2-201ENST00000438441 1338 ntBASIC7.16□□□□□ -1.26
CCNA1P78396 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.16□□□□□ -1.26
CCNA1P78396 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.16□□□□□ -1.26
CCNA1P78396 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
CCNA1P78396 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CCNA1P78396 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCNA1P78396 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCNA1P78396 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.15□□□□□ -1.26
CCNA1P78396 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCNA1P78396 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCNA1P78396 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCNA1P78396 AC024651.2-201ENST00000562480 2098 ntBASIC7.15□□□□□ -1.26
CCNA1P78396 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCNA1P78396 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
CCNA1P78396 OR52B3P-201ENST00000314715 928 ntBASIC7.15□□□□□ -1.26
CCNA1P78396 AL096800.1-201ENST00000405326 893 ntBASIC7.15□□□□□ -1.26
CCNA1P78396 Z68694.1-201ENST00000413929 841 ntBASIC7.15□□□□□ -1.26
CCNA1P78396 RPL35AP31-201ENST00000418340 337 ntBASIC7.15□□□□□ -1.26
CCNA1P78396 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC7.15□□□□□ -1.26
CCNA1P78396 AC079355.1-201ENST00000421770 223 ntBASIC7.15□□□□□ -1.26
CCNA1P78396 AC008753.1-201ENST00000423096 284 ntBASIC7.15□□□□□ -1.26
CCNA1P78396 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC7.15□□□□□ -1.26
CCNA1P78396 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CCNA1P78396 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.15□□□□□ -1.26
CCNA1P78396 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC7.15□□□□□ -1.26
CCNA1P78396 RPL5P11-201ENST00000498068 893 ntBASIC7.15□□□□□ -1.26
CCNA1P78396 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.15□□□□□ -1.26
CCNA1P78396 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.15□□□□□ -1.26
CCNA1P78396 Y_RNA.710-201ENST00000516975 110 ntBASIC7.15□□□□□ -1.26
CCNA1P78396 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CCNA1P78396 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.15□□□□□ -1.26
CCNA1P78396 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.15□□□□□ -1.26
CCNA1P78396 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.15□□□□□ -1.26
CCNA1P78396 SETP3-201ENST00000581726 813 ntBASIC7.15□□□□□ -1.26
CCNA1P78396 MIR6793-201ENST00000612376 63 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms