Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
UBA52P62987 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.49□□□□□ -1.53
UBA52P62987 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
UBA52P62987 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UBA52P62987 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.48□□□□□ -1.53
UBA52P62987 AC011815.2-201ENST00000618230 2021 ntBASIC5.48□□□□□ -1.53
UBA52P62987 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.48□□□□□ -1.53
UBA52P62987 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBA52P62987 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBA52P62987 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBA52P62987 AL355488.2-201ENST00000609909 2850 ntBASIC5.48□□□□□ -1.53
UBA52P62987 AC129502.1-201ENST00000623261 1654 ntBASIC5.48□□□□□ -1.53
UBA52P62987 AC130360.2-201ENST00000533477 1556 ntBASIC5.48□□□□□ -1.53
UBA52P62987 SAMM50P1-201ENST00000455403 1399 ntBASIC5.48□□□□□ -1.53
UBA52P62987 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
UBA52P62987 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBA52P62987 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBA52P62987 SNORD35A-201ENST00000363389 86 ntBASIC5.48□□□□□ -1.53
UBA52P62987 PPIAP26-201ENST00000377951 522 ntBASIC5.48□□□□□ -1.53
UBA52P62987 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.48□□□□□ -1.53
UBA52P62987 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.48□□□□□ -1.53
UBA52P62987 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC5.48□□□□□ -1.53
UBA52P62987 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.48□□□□□ -1.53
UBA52P62987 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.48□□□□□ -1.53
UBA52P62987 AC079807.1-201ENST00000429993 481 ntBASIC5.48□□□□□ -1.53
UBA52P62987 RPS10P21-201ENST00000430654 475 ntBASIC5.48□□□□□ -1.53
UBA52P62987 AC009237.1-201ENST00000442127 744 ntBASIC5.48□□□□□ -1.53
UBA52P62987 RPS10P18-201ENST00000442662 495 ntBASIC5.48□□□□□ -1.53
UBA52P62987 SNRPBP1-201ENST00000443634 282 ntBASIC5.48□□□□□ -1.53
UBA52P62987 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.48□□□□□ -1.53
UBA52P62987 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.48□□□□□ -1.53
UBA52P62987 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.48□□□□□ -1.53
UBA52P62987 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.48□□□□□ -1.53
UBA52P62987 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.48□□□□□ -1.53
UBA52P62987 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC5.48□□□□□ -1.53
UBA52P62987 AC106822.1-201ENST00000502647 526 ntBASIC5.48□□□□□ -1.53
UBA52P62987 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.48□□□□□ -1.53
UBA52P62987 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.48□□□□□ -1.53
UBA52P62987 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.48□□□□□ -1.53
UBA52P62987 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.48□□□□□ -1.53
UBA52P62987 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
UBA52P62987 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.48□□□□□ -1.53
UBA52P62987 NDUFA5P11-201ENST00000567995 343 ntBASIC5.48□□□□□ -1.53
UBA52P62987 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.48□□□□□ -1.53
UBA52P62987 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.48□□□□□ -1.53
UBA52P62987 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
UBA52P62987 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
UBA52P62987 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
UBA52P62987 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
UBA52P62987 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBA52P62987 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
UBA52P62987 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
UBA52P62987 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
UBA52P62987 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UBA52P62987 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBA52P62987 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.47□□□□□ -1.53
UBA52P62987 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
UBA52P62987 AL512329.1-201ENST00000404600 1592 ntBASIC5.47□□□□□ -1.53
UBA52P62987 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBA52P62987 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UBA52P62987 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBA52P62987 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.47□□□□□ -1.53
UBA52P62987 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBA52P62987 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBA52P62987 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
UBA52P62987 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.47□□□□□ -1.53
UBA52P62987 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
UBA52P62987 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.47□□□□□ -1.53
UBA52P62987 RNU1-46P-201ENST00000384425 164 ntBASIC5.47□□□□□ -1.53
UBA52P62987 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
UBA52P62987 U3.23-201ENST00000391132 200 ntBASIC5.47□□□□□ -1.53
UBA52P62987 UBBP1-201ENST00000392399 473 ntBASIC5.47□□□□□ -1.53
UBA52P62987 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
UBA52P62987 VN1R3-201ENST00000418822 919 ntBASIC5.47□□□□□ -1.53
UBA52P62987 AC009506.2-201ENST00000420635 840 ntBASIC5.47□□□□□ -1.53
UBA52P62987 GPN3P1-201ENST00000423883 535 ntBASIC5.47□□□□□ -1.53
UBA52P62987 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.47□□□□□ -1.53
UBA52P62987 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC5.47□□□□□ -1.53
UBA52P62987 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UBA52P62987 AL645939.3-201ENST00000435408 225 ntBASIC5.47□□□□□ -1.53
UBA52P62987 AL590399.4-201ENST00000436561 601 ntBASIC5.47□□□□□ -1.53
UBA52P62987 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.47□□□□□ -1.53
UBA52P62987 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.47□□□□□ -1.53
UBA52P62987 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.47□□□□□ -1.53
UBA52P62987 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.47□□□□□ -1.53
UBA52P62987 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
UBA52P62987 Z83838.1-202ENST00000456225 839 ntBASIC5.47□□□□□ -1.53
UBA52P62987 AC005017.1-201ENST00000482002 490 ntBASIC5.47□□□□□ -1.53
UBA52P62987 RN7SL413P-201ENST00000482700 297 ntBASIC5.47□□□□□ -1.53
UBA52P62987 NPM1P27-201ENST00000502784 830 ntBASIC5.47□□□□□ -1.53
UBA52P62987 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC5.47□□□□□ -1.53
UBA52P62987 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.47□□□□□ -1.53
UBA52P62987 AC005363.1-201ENST00000530779 351 ntBASIC5.47□□□□□ -1.53
UBA52P62987 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.47□□□□□ -1.53
UBA52P62987 AC124891.1-201ENST00000536322 519 ntBASIC5.47□□□□□ -1.53
UBA52P62987 AC007068.2-201ENST00000543168 395 ntBASIC5.47□□□□□ -1.53
UBA52P62987 NXPE2P1-201ENST00000543705 726 ntBASIC5.47□□□□□ -1.53
UBA52P62987 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms